RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 KLHL25Q9H0H3 589 aa13.4□□□□□ -0.26
ATPAF2-208ENST00000496852 NPHS2Q9NP85 383 aa13.4□□□□□ -0.26
ATPAF2-208ENST00000496852 PNPOQ9NVS9 261 aa13.4□□□□□ -0.26
ATPAF2-208ENST00000496852 ZDHHC2Q9UIJ5 367 aa13.4□□□□□ -0.26
ATPAF2-208ENST00000496852 SPEGQ15772 3267 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 SCN3AQ9NY46 2000 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 SLC9B1P1A6NJY1 282 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 NDUFAB1O14561 156 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 PRAMEF10O60809 474 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 DKK1O94907 266 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 ENO1P06733 434 aaKnown RBP13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 ANKRD34CP0C6C1 535 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 TROVE2P10155 538 aaKnown RBP eCLIP13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 THRAP10827 490 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 HGFP14210 728 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 E2F1Q01094 437 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 SLBPQ14493 270 aaKnown RBP eCLIP13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 CPSF6Q16630 551 aaKnown RBP eCLIP13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 SH2D4BQ5SQS7 431 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 CACHD1Q5VU97 1274 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 ARHGAP22Q7Z5H3 698 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 ADCK2Q7Z695 626 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 MYLK4Q86YV6 388 aaPredicted RBP13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 SLITRK4Q8IW52 837 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 CDYL2Q8N8U2 506 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 C19orf47Q8N9M1 422 aaKnown RBP13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 ZNF740Q8NDX6 193 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 KCNA7Q96RP8 456 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 AIF1LQ9BQI0 150 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 PSD3Q9NYI0 1048 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 PILRAQ9UKJ1 303 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 DMXL1Q9Y485 3027 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 CEP250Q9BV73 2442 aa13.39□□□□□ -0.27
ATPAF2-208ENST00000496852 IGHV5-10-1A0A0J9YXX1 117 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 TRBC2A0A5B9 178 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 FEZF1A0PJY2 475 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 H0YIV9 168 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 HAT1O14929 419 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 AZIN1O14977 448 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 CTSVO60911 334 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 RASSF9O75901 435 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 ZBTB11O95625 1053 aaPredicted RBP13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 CAPN1P07384 714 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 CXCR2P25025 360 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 PDX1P52945 283 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 RELAQ04206 551 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 PAGE2BQ5JRK9 111 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 SNAP47Q5SQN1 464 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 KANK2Q63ZY3 851 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 SLCO6A1Q86UG4 719 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 KMT5CQ86Y97 462 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 LAS2Q8IYD9 372 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 KLHL6Q8WZ60 621 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 SLC41A2Q96JW4 573 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 TRIM55Q9BYV6 548 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 SLC29A3Q9BZD2 475 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 PITHD1Q9GZP4 211 aaPredicted RBP13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 CHRNA10Q9GZZ6 450 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 ZNF768Q9H5H4 540 aaKnown RBP13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 NT5DC2Q9H857 520 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 FAM60AQ9NP50 221 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 DCTN4Q9UJW0 460 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 ZNF490Q9ULM2 529 aaPredicted RBP13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 BTRCQ9Y297 605 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 TIMM22Q9Y584 194 aa13.38□□□□□ -0.27
ATPAF2-208ENST00000496852 SRRM3A6NNA2 597 aaPredicted RBP13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 TMEM233B4DJY2 109 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 FFAR3O14843 346 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 GPR42O15529 346 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 LCMT2O60294 686 aaKnown RBP13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 UROSP10746 265 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 EZRP15311 586 aaKnown RBP13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 GRK3P35626 688 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 RPL14P50914 215 aaKnown RBP13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 INSM1Q01101 510 aaPredicted RBP13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 ZFP36L1Q07352 338 aaKnown RBP13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 ZRSR2Q15696 482 aaKnown RBP13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 UGT3A2Q3SY77 523 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 CLEC6AQ6EIG7 209 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 MED27Q6P2C8 311 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 FBXO42Q6P3S6 717 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 TMIGD1Q6UXZ0 262 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 RNF44Q7L0R7 432 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 PLD3Q8IV08 490 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 WDR75Q8IWA0 830 aaKnown RBP13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 CLYBLQ8N0X4 340 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 KRT78Q8N1N4 520 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 CHCHD4Q8N4Q1 142 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 AFAP1L2Q8N4X5 818 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 ANKRD53Q8N9V6 530 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 WDR20Q8TBZ3 569 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 PIWIL2Q8TC59 973 aaKnown RBP13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 METTL6Q8TCB7 284 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 ZNF473Q8WTR7 871 aaKnown RBP13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 TCTN2Q96GX1 697 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 CCDC74BQ96LY2 380 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 SYNPO2LQ9H987 977 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 TSC22D4Q9Y3Q8 395 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 TRAF6Q9Y4K3 522 aa13.37□□□□□ -0.27
ATPAF2-208ENST00000496852 PCDHGA11Q9Y5H2 935 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms