RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 KLC1Q07866 573 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 CALCOCO2Q13137 446 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 SP140Q13342 867 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 EFTUD2Q15029 972 aaKnown RBP eCLIP11.62□□□□□ -0.553e-8■■■■■ 29.6
HDLBP-246ENST00000496569 RBBP7Q16576 425 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 MUM1Q2TAK8 710 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 FAM214AQ32MH5 1076 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 SBSNQ6UWP8 590 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 CTAGE6Q86UF2 777 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 PALM2Q8IXS6 379 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 SPATA6LQ8N4H0 392 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 RBMXL3Q8N7X1 1067 aaKnown RBP11.62□□□□□ -0.55
HDLBP-246ENST00000496569 AMER3Q8N944 861 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 TMEM102Q8N9M5 508 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-246ENST00000496569 ZNF740Q8NDX6 193 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 GABPB2Q8TAK5 448 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-246ENST00000496569 STT3BQ8TCJ2 826 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 MMABQ96EY8 250 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-246ENST00000496569 VPS39Q96JC1 886 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 CCDC138Q96M89 665 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 OR4K3Q96R72 315 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 CRB3Q9BUF7 120 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 SGPP1Q9BX95 441 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 CLMPQ9H6B4 373 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 GPR83Q9NYM4 423 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 WHRNQ9P202 907 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 TRPC4Q9UBN4 977 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 MTO1Q9Y2Z2 717 aaKnown RBP11.62□□□□□ -0.55
HDLBP-246ENST00000496569 HIVEP3Q5T1R4 2406 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 LRRK2Q5S007 2527 aa11.62□□□□□ -0.55
HDLBP-246ENST00000496569 USP9XQ93008 2570 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-246ENST00000496569 VSTM2BA6NLU5 285 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 AGPSO00116 658 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 PEX12O00623 359 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 PHGDHO43175 533 aaKnown RBP11.61□□□□□ -0.55
HDLBP-246ENST00000496569 FAM155BO75949 473 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 ONECUT2O95948 504 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 CELA2AP08217 269 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 ZGLP1P0C6A0 271 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 IL1RNP18510 177 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 MMP11P24347 488 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 CSRP3P50461 194 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 RRADP55042 308 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 ABATP80404 500 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 FOXK1P85037 733 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 KCNC4Q03721 635 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 EEF1A2Q05639 463 aaKnown RBP11.61□□□□□ -0.55
HDLBP-246ENST00000496569 TSNQ15631 228 aaKnown RBP11.61□□□□□ -0.55
HDLBP-246ENST00000496569 PPP1R3AQ16821 1122 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 FBXO48Q5FWF7 155 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 CATSPEREQ5SY80 951 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 YOD1Q5VVQ6 348 aaPredicted RBP11.61□□□□□ -0.55
HDLBP-246ENST00000496569 LRRC8EQ6NSJ5 796 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 KIRREL2Q6UWL6 708 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 MED25Q71SY5 747 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 C17orf64Q86WR6 236 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 ZGRF1Q86YA3 2104 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 PARP9Q8IXQ6 854 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 GALNT16Q8N428 558 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 Q8NA96 180 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 OR9A4Q8NGU2 314 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 FBXO25Q8TCJ0 367 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 PYROXD1Q8WU10 500 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 RERGQ96A58 199 aaPredicted RBP11.61□□□□□ -0.55
HDLBP-246ENST00000496569 TSNARE1Q96NA8 513 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 RBCK1Q9BYM8 510 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 SLC26A1Q9H2B4 701 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 RHOJQ9H4E5 214 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 ENAMQ9NRM1 1142 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 CORO1CQ9ULV4 474 aaPredicted RBP11.61□□□□□ -0.55
HDLBP-246ENST00000496569 CSAG2Q9Y5P2 127 aa11.61□□□□□ -0.55
HDLBP-246ENST00000496569 TCRBV9S1A1TA0A576 114 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 OR2W5A6NFC9 320 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 ZNF860A6NHJ4 632 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 SLC16A5O15375 505 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 ALBP02768 609 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 PIM1P11309 404 aaPredicted RBP11.6□□□□□ -0.55
HDLBP-246ENST00000496569 NPPBP16860 134 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 ITGA3P26006 1051 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 UQCRFS1P47985 274 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 Q0VFX4 171 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 FRG1Q14331 258 aaKnown RBP11.6□□□□□ -0.55
HDLBP-246ENST00000496569 NAA25Q14CX7 972 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 SLC6A19Q695T7 634 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 LCTLQ6UWM7 567 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 MAATS1Q7Z4T9 603 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 SLC26A11Q86WA9 606 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 ZC3H7AQ8IWR0 971 aaKnown RBP11.6□□□□□ -0.55
HDLBP-246ENST00000496569 CLEC1AQ8NC01 280 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 KCT2Q8NC54 265 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 OR11G2Q8NGC1 345 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 OR56A3Q8NH54 315 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 MIEF2Q96C03 454 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 FBXL8Q96CD0 374 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 MOCOSQ96EN8 888 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 FER1L6-AS2Q96M78 137 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 MCMBPQ9BTE3 642 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 DRC3Q9H069 523 aa11.6□□□□□ -0.55
HDLBP-246ENST00000496569 ZNF552Q9H707 407 aaPredicted RBP11.6□□□□□ -0.55
HDLBP-246ENST00000496569 WDR54Q9H977 334 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms