RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PAGE3Q5JUK9 113 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 SPANXN4Q5MJ08 99 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 ZNF648Q5T619 568 aaPredicted RBP6.69□□□□□ -1.34
USP39-219ENST00000496047 PIP5KL1Q5T9C9 394 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 GLYATQ6IB77 296 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 KRT80Q6KB66 452 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 NOXRED1Q6NXP6 359 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 NEK5Q6P3R8 708 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 SYCE2Q6PIF2 218 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 ZBTB49Q6ZSB9 765 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 PAGE2Q7Z2X7 111 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 C17orf64Q86WR6 236 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 RASGRP3Q8IV61 690 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 OXR1Q8N573 874 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 MEIOBQ8N635 442 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 NATD1Q8N6N6 113 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 TRIML2Q8N7C3 387 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 ANKFN1Q8N957 763 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 CDC26Q8NHZ8 85 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 WDR20Q8TBZ3 569 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 SLC5A11Q8WWX8 675 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 SH3KBP1Q96B97 665 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 COX14Q96I36 57 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 APOLD1Q96LR9 279 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 PPM1MQ96MI6 270 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 CCDC115Q96NT0 180 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 QRFPRQ96P65 431 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 TSSK3Q96PN8 268 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 MYADMQ96S97 322 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 UHRF1Q96T88 793 aaPredicted RBP6.69□□□□□ -1.34
USP39-219ENST00000496047 PKP2Q99959 881 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 AIF1LQ9BQI0 150 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 TIMM29Q9BSF4 260 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 ASPSCR1Q9BZE9 553 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 ZFAND3Q9H8U3 227 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 PELI2Q9HAT8 420 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 FARSBQ9NSD9 589 aaKnown RBP6.69□□□□□ -1.34
USP39-219ENST00000496047 CMTM6Q9NX76 183 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 CLDND1Q9NY35 253 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 MAN2B2Q9Y2E5 1009 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 TDRKHQ9Y2W6 561 aaKnown RBP6.69□□□□□ -1.34
USP39-219ENST00000496047 CCL27Q9Y4X3 112 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 HEBP2Q9Y5Z4 205 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 AP4B1Q9Y6B7 739 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 AP1M2Q9Y6Q5 423 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 NCOR1O75376 2440 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 A0A1W2PP55 124 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 PIPSLA2A3N6 862 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 ASPDHA6ND91 283 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 TMEM202A6NGA9 273 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 IGLON5A6NGN9 336 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 ANKDD1BA6NHY2 528 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 FOXE1O00358 373 aaPredicted RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 CDK2AP1O14519 115 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 GNGT2O14610 69 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 FPGTO14772 594 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 ANKRD28O15084 1053 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 SPINT1O43278 529 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 DENRO43583 198 aaKnown RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 PLRG1O43660 514 aaKnown RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 PCDH7O60245 1069 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 TIPRLO75663 272 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 SOD1P00441 154 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 LDLRP01130 860 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 FAM58BPP0C7Q3 252 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 RAP2AP10114 183 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 EPORP19235 508 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 GGT1P19440 569 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 ATP6V1B2P21281 511 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 GSTM2P28161 218 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 NDUFS1P28331 727 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 IL12AP29459 219 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 TIA1P31483 386 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP39-219ENST00000496047 GRK3P35626 688 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 PIK3CBP42338 1070 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 WASP42768 502 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 CHN2P52757 468 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 DGKQP52824 942 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 C21orf58P58505 322 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 PSMA6P60900 246 aaKnown RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 MRPS21P82921 87 aaKnown RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 FOLH1Q04609 750 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 ZNF763Q0D2J5 394 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 ABHD18Q0P651 414 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 ADAM15Q13444 863 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 BIRC2Q13490 618 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 SLBPQ14493 270 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP39-219ENST00000496047 NFE2L1Q14494 772 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 PTGR1Q14914 329 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 PDK3Q15120 406 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 RBBP5Q15291 538 aaKnown RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 IRF4Q15306 451 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 ADRM1Q16186 407 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 DUOXA1Q1HG43 343 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 FBXO43Q4G163 708 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 SFT2D3Q587I9 215 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 RABL3Q5HYI8 236 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 EOGTQ5NDL2 527 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 LRIF1Q5T3J3 769 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 INTS11Q5TA45 600 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms