RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	BANP	Q8N9N5	519 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	ABHD11	Q8NFV4	315 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	OR1L3	Q8NH93	324 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	UBTD2	Q8WUN7	234 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	EXT2	Q93063	718 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	NEIL2	Q969S2	332 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	ALKBH8	Q96BT7	664 aa	Known RBP	11.4	□□□□□ -0.58
APTX-233	ENST00000496030	ZNF285	Q96NJ3	590 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	PRAP1	Q96NZ9	151 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	HAUS8	Q9BT25	410 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	CD244	Q9BZW8	370 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	MRPL46	Q9H2W6	279 aa	Known RBP	11.4	□□□□□ -0.58
APTX-233	ENST00000496030	C12orf65	Q9H3J6	166 aa	Known RBP	11.4	□□□□□ -0.58
APTX-233	ENST00000496030	THSD1	Q9NS62	852 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	STARD5	Q9NSY2	213 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	SOHLH2	Q9NX45	425 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	CPSF2	Q9P2I0	782 aa	Known RBP	11.4	□□□□□ -0.58
APTX-233	ENST00000496030	DCDC2	Q9UHG0	476 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	SNX7	Q9UNH6	387 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	CREBBP	Q92793	2442 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	LOC105369274	A0A096LPK9	316 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	LOC102723532	A0A0G2JNH3	316 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	PABPN1L	A6NDY0	278 aa	Known RBP	11.39	□□□□□ -0.59
APTX-233	ENST00000496030	SYCE1L	A8MT33	242 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	POLR1C	O15160	346 aa	Predicted RBP	11.39	□□□□□ -0.59
APTX-233	ENST00000496030	EFS	O43281	561 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	STK16	O75716	305 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	IPO13	O94829	963 aa	Known RBP	11.39	□□□□□ -0.59
APTX-233	ENST00000496030	CCNDBP1	O95273	360 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	PROC	P04070	461 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	CDH1	P12830	882 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	ZNF28	P17035	718 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	RBMS1	P29558	406 aa	Known RBP	11.39	□□□□□ -0.59
APTX-233	ENST00000496030	GCGR	P47871	477 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	ALDH18A1	P54886	795 aa	Known RBP	11.39	□□□□□ -0.59
APTX-233	ENST00000496030	ACY1	Q03154	408 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	FOXM1	Q08050	763 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	CASP8	Q14790	479 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
APTX-233	ENST00000496030	PFKFB4	Q16877	469 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	DEFB110	Q30KQ9	67 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	KRT71	Q3SY84	523 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
APTX-233	ENST00000496030	CATSPERE	Q5SY80	951 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	CEP85L	Q5SZL2	805 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	TMTC4	Q5T4D3	741 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	PRAMEF17	Q5VTA0	474 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	FRMPD2B	Q6IN97	320 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	PWWP2B	Q6NUJ5	590 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	CCDC81	Q6ZN84	652 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	SLCO4C1	Q6ZQN7	724 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	RNF44	Q7L0R7	432 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	BPHL	Q86WA6	291 aa	Predicted RBP	11.39	□□□□□ -0.59
APTX-233	ENST00000496030	C17orf64	Q86WR6	236 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	PLD3	Q8IV08	490 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	OR4N4	Q8N0Y3	316 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	C4orf33	Q8N1A6	199 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	SCYL1	Q96KG9	808 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	FCRL4	Q96PJ5	515 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	OR2A5	Q96R48	311 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	ASPSCR1	Q9BZE9	553 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	SPRTN	Q9H040	489 aa	Predicted RBP	11.39	□□□□□ -0.59
APTX-233	ENST00000496030	SPNS1	Q9H2V7	528 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	TMEM184C	Q9NVA4	438 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	WWOX	Q9NZC7	414 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	ACSL6	Q9UKU0	697 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	PLCL2	Q9UPR0	1127 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	FER1L5	A0AVI2	2057 aa		11.39	□□□□□ -0.59
APTX-233	ENST00000496030	SPTBN1	Q01082	2364 aa	Known RBP	11.38	□□□□□ -0.59
APTX-233	ENST00000496030	TMEM150C	B9EJG8	249 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030		G3V2L1	256 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	AGPS	O00116	658 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	HAT1	O14929	419 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	LCMT2	O60294	686 aa	Known RBP	11.38	□□□□□ -0.59
APTX-233	ENST00000496030	DLX3	O60479	287 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	PLIN3	O60664	434 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	WDR47	O94967	919 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	SIX3	O95343	332 aa	Predicted RBP	11.38	□□□□□ -0.59
APTX-233	ENST00000496030	HRH2	P25021	359 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	RAB15	P59190	212 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	PCDH1	Q08174	1060 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	CLN3	Q13286	438 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	UBAP2L	Q14157	1087 aa	Known RBP	11.38	□□□□□ -0.59
APTX-233	ENST00000496030	E2F2	Q14209	437 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	DCAF12	Q5T6F0	453 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	NXPE4	Q6UWF7	544 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	CEACAM20	Q6UY09	585 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	TIPARP	Q7Z3E1	657 aa	Known RBP	11.38	□□□□□ -0.59
APTX-233	ENST00000496030	SRRM1	Q8IYB3	904 aa	Known RBP	11.38	□□□□□ -0.59
APTX-233	ENST00000496030	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.38	□□□□□ -0.59
APTX-233	ENST00000496030	SLC38A9	Q8NBW4	561 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	ZNF740	Q8NDX6	193 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	OR8K5	Q8NH50	307 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	SLC5A11	Q8WWX8	675 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	RNF31	Q96EP0	1072 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	PGM2	Q96G03	612 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	TSNARE1	Q96NA8	513 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	SARG	Q9BW04	601 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	CNOT10	Q9H9A5	744 aa	Known RBP	11.38	□□□□□ -0.59
APTX-233	ENST00000496030	DNAJC11	Q9NVH1	559 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms