RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ANXA6P08133 673 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 ITGA2BP08514 1039 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 MYBL1P10243 752 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 ITGB6P18564 788 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 RFC1P35251 1148 aaPredicted RBP6.36□□□□□ -1.39
VIM-207ENST00000495528 ARHGAP25P42331 645 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 SULT1E1P49888 294 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 SERPINH1P50454 418 aaKnown RBP6.36□□□□□ -1.39
VIM-207ENST00000495528 CSRP3P50461 194 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 RPL7AP62424 266 aaKnown RBP6.36□□□□□ -1.39
VIM-207ENST00000495528 TUBA4AP68366 448 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 RAE1P78406 368 aaKnown RBP6.36□□□□□ -1.39
VIM-207ENST00000495528 CCL7P80098 99 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 CFHR3Q02985 330 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 SLC20A2Q08357 652 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 GALNT1Q10472 559 aaPredicted RBP6.36□□□□□ -1.39
VIM-207ENST00000495528 MAMLD1Q13495 774 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 PTK2BQ14289 1009 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 CSHL1Q14406 222 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 CCDC38Q502W7 563 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 FAM90A2PQ658T7 463 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 PLEKHA7Q6IQ23 1121 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 RETSATQ6NUM9 610 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 DNAJC24Q6P3W2 148 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 DCUN1D2Q6PH85 259 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 LRRC31Q6UY01 552 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 RYBPQ8N488 228 aaPredicted RBP6.36□□□□□ -1.39
VIM-207ENST00000495528 GALNT4Q8N4A0 578 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 PCDH20Q8N6Y1 951 aaKnown RBP6.36□□□□□ -1.39
VIM-207ENST00000495528 EMC1Q8N766 993 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 OR6K2Q8NGY2 324 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 JOSD2Q8TAC2 188 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 ASB12Q8WXK4 309 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 DDB2Q92466 427 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 DPF1Q92782 380 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 NAT6Q93015 286 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 NT5C3BQ969T7 300 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 FYTTD1Q96QD9 318 aaKnown RBP6.36□□□□□ -1.39
VIM-207ENST00000495528 NUDT22Q9BRQ3 303 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 LRRC61Q9BV99 259 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 NUP85Q9BW27 656 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 TM6SF2Q9BZW4 377 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 ZDHHC6Q9H6R6 413 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 MRPL47Q9HD33 250 aaKnown RBP6.36□□□□□ -1.39
VIM-207ENST00000495528 MBNL1Q9NR56 388 aaKnown RBP6.36□□□□□ -1.39
VIM-207ENST00000495528 HEMK1Q9Y5R4 338 aaPredicted RBP6.36□□□□□ -1.39
VIM-207ENST00000495528 MYO18BQ8IUG5 2567 aa6.36□□□□□ -1.39
VIM-207ENST00000495528 TRPM6Q9BX84 2022 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 A0A1W2PQM1 296 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 LINC01548A6NM66 108 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 F9P00740 461 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 PRKCGP05129 697 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 TNNT1P13805 278 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 MSNP26038 577 aaKnown RBP6.35□□□□□ -1.39
VIM-207ENST00000495528 UGT1A5P35504 534 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 THOP1P52888 689 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 YPEL5P62699 121 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 GNA12Q03113 381 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 PPARDQ03181 441 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 SRSF1Q07955 248 aaKnown RBP eCLIP6.35□□□□□ -1.39
VIM-207ENST00000495528 MESDQ14696 234 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 SLC25A52Q3SY17 297 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 RAB6CQ53S08 254 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 ZNF805Q5CZA5 627 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 LRRC73Q5JTD7 316 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 COLEC12Q5KU26 742 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 ZNF569Q5MCW4 686 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 TRNP1Q6NT89 227 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 LEKR1Q6ZMV7 388 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 RAB11FIP2Q7L804 512 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 ZSCAN30Q86W11 494 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 ZDHHC17Q8IUH5 632 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 FBXO39Q8N4B4 442 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 DENND6BQ8NEG7 585 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 ZNF564Q8TBZ8 553 aaPredicted RBP6.35□□□□□ -1.39
VIM-207ENST00000495528 FAM71BQ8TC56 605 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 NTN5Q8WTR8 489 aaPredicted RBP6.35□□□□□ -1.39
VIM-207ENST00000495528 RXFP2Q8WXD0 754 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 RAB7BQ96AH8 199 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 SGF29Q96ES7 293 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 PGAP3Q96FM1 320 aaPredicted RBP6.35□□□□□ -1.39
VIM-207ENST00000495528 TBATAQ96M53 351 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 ADGRE3Q9BY15 652 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 TSGA10Q9BZW7 698 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 TRIM7Q9C029 511 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 ZYG11BQ9C0D3 744 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 RAB6CQ9H0N0 254 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 EPB41L5Q9HCM4 733 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 STARD5Q9NSY2 213 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 RRN3Q9NYV6 651 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 STAP1Q9ULZ2 295 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 SCINQ9Y6U3 715 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 RP1P56715 2156 aa6.35□□□□□ -1.39
VIM-207ENST00000495528 COL27A1Q8IZC6 1860 aaPredicted RBP6.34□□□□□ -1.39
VIM-207ENST00000495528 NYNRINQ9P2P1 1898 aaKnown RBP6.34□□□□□ -1.39
VIM-207ENST00000495528 MAST4O15021 2626 aa6.34□□□□□ -1.39
VIM-207ENST00000495528 KIF26BQ2KJY2 2108 aa6.34□□□□□ -1.39
VIM-207ENST00000495528 NAV2Q8IVL1 2488 aa6.34□□□□□ -1.39
VIM-207ENST00000495528 SPTA1P02549 2419 aa6.34□□□□□ -1.39
VIM-207ENST00000495528 BTNL10A8MVZ5 291 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms