RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ESX1Q8N693 406 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 PTGR2Q8N8N7 351 aaPredicted RBP18.57■□□□□ 0.56
HDAC4-212ENST00000495497 UBTD2Q8WUN7 234 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 HNRNPLLQ8WVV9 542 aaKnown RBP18.57■□□□□ 0.56
HDAC4-212ENST00000495497 ZIM3Q96PE6 472 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 MRPL46Q9H2W6 279 aaKnown RBP18.57■□□□□ 0.56
HDAC4-212ENST00000495497 C12orf65Q9H3J6 166 aaKnown RBP18.57■□□□□ 0.56
HDAC4-212ENST00000495497 PELI2Q9HAT8 420 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 LHX9Q9NQ69 397 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 LGALS13Q9UHV8 139 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 AP1M2Q9Y6Q5 423 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 A0A087WV48 116 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 CCDC151A5D8V7 595 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 MEN1O00255 615 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 CCNYL3P0C7X3 344 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 KRT4P19013 534 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 GNAZP19086 355 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 EPORP19235 508 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 ALAS2P22557 587 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 RORAP35398 523 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 GCGRP47871 477 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 ALDH18A1P54886 795 aaKnown RBP18.56■□□□□ 0.56
HDAC4-212ENST00000495497 RPS15AP62244 130 aaKnown RBP18.56■□□□□ 0.56
HDAC4-212ENST00000495497 RELAQ04206 551 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 TLE3Q04726 772 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 MAP7Q14244 749 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 PDK4Q16654 411 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 KRT71Q3SY84 523 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 MANEAQ5SRI9 462 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 BEND6Q5SZJ8 279 aaPredicted RBP18.56■□□□□ 0.56
HDAC4-212ENST00000495497 SLCO4C1Q6ZQN7 724 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 TTLL10Q6ZVT0 673 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 LRRC70Q7Z2Q7 622 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 VN1R4Q7Z5H5 301 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 DSELQ8IZU8 1212 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 IQCKQ8N0W5 287 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 RIBC1Q8N443 379 aaPredicted RBP18.56■□□□□ 0.56
HDAC4-212ENST00000495497 TEX9Q8N6V9 391 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 CSNK1A1LQ8N752 337 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 TTC29Q8NA56 475 aaPredicted RBP18.56■□□□□ 0.56
HDAC4-212ENST00000495497 MR1Q95460 341 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 RERGQ96A58 199 aaPredicted RBP18.56■□□□□ 0.56
HDAC4-212ENST00000495497 RUFY1Q96T51 708 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 NDC1Q9BTX1 674 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 TMEM109Q9BVC6 243 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 CUTCQ9NTM9 273 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 OPTCQ9UBM4 332 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 NDOR1Q9UHB4 597 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 PADI1Q9ULC6 663 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 TPRP12270 2363 aaKnown RBP18.56■□□□□ 0.56
HDAC4-212ENST00000495497 SPTBP11277 2137 aa18.56■□□□□ 0.56
HDAC4-212ENST00000495497 FITM1A5D6W6 292 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 K7EPI3 171 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 CLGNO14967 610 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 EFSO43281 561 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 CTIFO43310 598 aaKnown RBP18.55■□□□□ 0.56
HDAC4-212ENST00000495497 OR1F1O43749 312 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 SMIM24O75264 130 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 GSTA1P08263 222 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 C1GALT1C1LP0DN25 315 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 LIFP15018 202 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 F8A1P23610 371 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 EEF1DP29692 281 aaKnown RBP18.55■□□□□ 0.56
HDAC4-212ENST00000495497 GRK3P35626 688 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 STAT5AP42229 794 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 SNRPNP63162 240 aaKnown RBP18.55■□□□□ 0.56
HDAC4-212ENST00000495497 REEP5Q00765 189 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 ABHD18Q0P651 414 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 GRM7Q14831 915 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 RBBP5Q15291 538 aaKnown RBP18.55■□□□□ 0.56
HDAC4-212ENST00000495497 PRTGQ2VWP7 1150 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 RHBDD2Q6NTF9 364 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 METTL27Q8N6F8 245 aaPredicted RBP18.55■□□□□ 0.56
HDAC4-212ENST00000495497 MFSD9Q8NBP5 474 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 CT55Q8WUE5 264 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 GEMIN8Q9NWZ8 242 aaKnown RBP18.55■□□□□ 0.56
HDAC4-212ENST00000495497 GPRC5BQ9NZH0 403 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 DCDC2Q9UHG0 476 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 CROTQ9UKG9 612 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 EMCNQ9ULC0 261 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 RUVBL1Q9Y265 456 aaKnown RBP18.55■□□□□ 0.56
HDAC4-212ENST00000495497 PCDHGA4Q9Y5G9 962 aa18.55■□□□□ 0.56
HDAC4-212ENST00000495497 URB1O60287 2271 aaKnown RBP18.54■□□□□ 0.56
HDAC4-212ENST00000495497 KCNE1BA0A087WTH5 132 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 TRBC2A0A5B9 178 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 HYKKA2RU49 373 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 A8MT66 165 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 COPEO14579 308 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 HBQ1P09105 142 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 WT1P19544 449 aaPredicted RBP18.54■□□□□ 0.56
HDAC4-212ENST00000495497 DLSTP36957 453 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 SLC18A2Q05940 514 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 DOC2AQ14183 400 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 SLBPQ14493 270 aaKnown RBP eCLIP18.54■□□□□ 0.56
HDAC4-212ENST00000495497 SLC9A5Q14940 896 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 PCBP2Q15366 365 aaKnown RBP eCLIP18.54■□□□□ 0.56
HDAC4-212ENST00000495497 XKR6Q5GH73 641 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 CEP85LQ5SZL2 805 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 ZNF385CQ66K41 422 aaPredicted RBP18.54■□□□□ 0.56
HDAC4-212ENST00000495497 ATG9BQ674R7 924 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms