RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	RIC8B	Q9NVN3	520 aa		13.01	□□□□□ -0.33
APTX-231	ENST00000494973	PSD3	Q9NYI0	1048 aa		13.01	□□□□□ -0.33
APTX-231	ENST00000494973	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.01	□□□□□ -0.33
APTX-231	ENST00000494973	SEMA5B	Q9P283	1151 aa		13.01	□□□□□ -0.33
APTX-231	ENST00000494973	BTRC	Q9Y297	605 aa		13.01	□□□□□ -0.33
APTX-231	ENST00000494973	WDFY4	Q6ZS81	3184 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	KCNE1B	A0A087WTH5	132 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	SERTM1	A2A2V5	107 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	ANKDD1B	A6NHY2	528 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973		D6RAR5	112 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	SLC28A1	O00337	649 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	FOXE1	O00358	373 aa	Predicted RBP	13	□□□□□ -0.33
APTX-231	ENST00000494973	NTN3	O00634	580 aa	Predicted RBP	13	□□□□□ -0.33
APTX-231	ENST00000494973	PCSK2	P16519	638 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	CSF2RB	P32927	897 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	MLLT3	P42568	568 aa	Predicted RBP	13	□□□□□ -0.33
APTX-231	ENST00000494973	CCL7	P80098	99 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	HSD11B2	P80365	405 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	ZRSR2	Q15696	482 aa	Known RBP	13	□□□□□ -0.33
APTX-231	ENST00000494973	NKAIN2	Q5VXU1	208 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	RBM44	Q6ZP01	1051 aa	Known RBP	13	□□□□□ -0.33
APTX-231	ENST00000494973	FAM92B	Q6ZTR7	304 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	RPS27L	Q71UM5	84 aa	Known RBP	13	□□□□□ -0.33
APTX-231	ENST00000494973	RNF44	Q7L0R7	432 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	TWIST2	Q8WVJ9	160 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	SELENOM	Q8WWX9	145 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	USP7	Q93009	1102 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	METTL2A	Q96IZ6	378 aa	Known RBP	13	□□□□□ -0.33
APTX-231	ENST00000494973	TRAPPC9	Q96Q05	1148 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	CDK15	Q96Q40	435 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	MAP3K3	Q99759	626 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	ZFYVE21	Q9BQ24	234 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	RHBG	Q9H310	441 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	ZNF768	Q9H5H4	540 aa	Known RBP	13	□□□□□ -0.33
APTX-231	ENST00000494973	MRGBP	Q9NV56	204 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	FGFR1OP2	Q9NVK5	253 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13	□□□□□ -0.33
APTX-231	ENST00000494973	SOHLH2	Q9NX45	425 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	PDP2	Q9P2J9	529 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	ZDHHC2	Q9UIJ5	367 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	ZFP69B	Q9UJL9	534 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	APOBEC2	Q9Y235	224 aa	Known RBP	13	□□□□□ -0.33
APTX-231	ENST00000494973	RNF11	Q9Y3C5	154 aa		13	□□□□□ -0.33
APTX-231	ENST00000494973	FAM186A	A6NE01	2351 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	RP1	P56715	2156 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	IGKV1-8	A0A0C4DH67	115 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973		A0A1W2PQM1	296 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	URAD	A6NGE7	173 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	MANBA	O00462	879 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	RGS14	O43566	566 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	GDF9	O60383	454 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	SRPX2	O60687	465 aa	Predicted RBP	12.99	□□□□□ -0.33
APTX-231	ENST00000494973	CLEC3A	O75596	197 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	SLC35G6	P0C7Q6	338 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	MSL3P1	P0C860	447 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	THRA	P10827	490 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	MYF5	P13349	255 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	ALOX15	P16050	662 aa	Predicted RBP	12.99	□□□□□ -0.33
APTX-231	ENST00000494973	VARS	P26640	1264 aa	Known RBP	12.99	□□□□□ -0.33
APTX-231	ENST00000494973	ARRB2	P32121	409 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	CCR10	P46092	362 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	SCTR	P47872	440 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	INHBC	P55103	352 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	GFER	P55789	205 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	TGM3	Q08188	693 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	RBBP5	Q15291	538 aa	Known RBP	12.99	□□□□□ -0.33
APTX-231	ENST00000494973	TRIP6	Q15654	476 aa	Known RBP	12.99	□□□□□ -0.33
APTX-231	ENST00000494973	IMPG1	Q17R60	797 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	MANEA	Q5SRI9	462 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	CES4A	Q5XG92	561 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	USP53	Q70EK8	1073 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	TRIM73	Q86UV7	250 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	DCBLD1	Q8N8Z6	715 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	MFSD9	Q8NBP5	474 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	CAMKV	Q8NCB2	501 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	SRFBP1	Q8NEF9	429 aa	Known RBP	12.99	□□□□□ -0.33
APTX-231	ENST00000494973	OR7G3	Q8NG95	312 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	AGR3	Q8TD06	166 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	N4BP2L2	Q92802	583 aa	Predicted RBP	12.99	□□□□□ -0.33
APTX-231	ENST00000494973	C19orf60	Q96EN9	201 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	SERPINI1	Q99574	410 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	SHCBP1L	Q9BZQ2	653 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	C20orf27	Q9GZN8	174 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	ACSS2	Q9NR19	701 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	KLHL14	Q9P2G3	628 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	ZNF225	Q9UK10	706 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	SH2B3	Q9UQQ2	575 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	DNAJC15	Q9Y5T4	150 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	USH1C	Q9Y6N9	552 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	HEATR5B	Q9P2D3	2071 aa		12.99	□□□□□ -0.33
APTX-231	ENST00000494973	RIF1	Q5UIP0	2472 aa	Known RBP	12.98	□□□□□ -0.33
APTX-231	ENST00000494973	SLC9B1P1	A6NJY1	282 aa		12.98	□□□□□ -0.33
APTX-231	ENST00000494973	PPP6C	O00743	305 aa		12.98	□□□□□ -0.33
APTX-231	ENST00000494973	HAT1	O14929	419 aa		12.98	□□□□□ -0.33
APTX-231	ENST00000494973	OR1F1	O43749	312 aa		12.98	□□□□□ -0.33
APTX-231	ENST00000494973	FAM107A	O95990	144 aa		12.98	□□□□□ -0.33
APTX-231	ENST00000494973	PCNA	P12004	261 aa		12.98	□□□□□ -0.33
APTX-231	ENST00000494973	ST6GAL1	P15907	406 aa		12.98	□□□□□ -0.33
APTX-231	ENST00000494973	CD22	P20273	847 aa		12.98	□□□□□ -0.33
APTX-231	ENST00000494973	ARFIP1	P53367	373 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms