RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 LRFN5Q96NI6 719 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 OR2A5Q96R48 311 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 LGALS13Q9UHV8 139 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 MDC1Q14676 2089 aaKnown RBP11.93□□□□□ -0.5
TRA2A-209ENST00000494255 SPTBP11277 2137 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 A0A087WV48 116 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 FEZF1A0PJY2 475 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 FITM1A5D6W6 292 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 SRRM3A6NNA2 597 aaPredicted RBP11.92□□□□□ -0.5
TRA2A-209ENST00000494255 FOXO6A8MYZ6 492 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 K7EPI3 171 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 TK2O00142 265 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 COPEO14579 308 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 OR1F1O43749 312 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 C1GALT1C1LP0DN25 315 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 EPB42P16452 691 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 AGXTP21549 392 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 CXCR2P25025 360 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 STAT5AP42229 794 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 CCT5P48643 541 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 PIK3CGP48736 1102 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 REEP5Q00765 189 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 MEF2AQ02078 507 aaPredicted RBP11.92□□□□□ -0.5
TRA2A-209ENST00000494255 GPS2Q13227 327 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 RHBDD2Q6NTF9 364 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 CROCCP2Q86T23 111 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 PTGR2Q8N8N7 351 aaPredicted RBP11.92□□□□□ -0.5
TRA2A-209ENST00000494255 OR4K1Q8NGD4 311 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 PROKR1Q8TCW9 393 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 PHF21BQ96EK2 531 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 CCNL2Q96S94 520 aaPredicted RBP11.92□□□□□ -0.5
TRA2A-209ENST00000494255 EFHD1Q9BUP0 239 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 LHX9Q9NQ69 397 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 STARD5Q9NSY2 213 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 CUTCQ9NTM9 273 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 TMEM216Q9P0N5 145 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 NDOR1Q9UHB4 597 aa11.92□□□□□ -0.5
TRA2A-209ENST00000494255 URB1O60287 2271 aaKnown RBP11.92□□□□□ -0.5
TRA2A-209ENST00000494255 ACACAQ13085 2346 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 KCNE1BA0A087WTH5 132 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 HYKKA2RU49 373 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 STX16-NPEPL1H3BU86 382 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 MEN1O00255 615 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 STX16O14662 325 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 KRT4P19013 534 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 ALAS2P22557 587 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 BCL6P41182 706 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 UCNP55089 124 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 IRF8Q02556 426 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 PCBP2Q15366 365 aaKnown RBP eCLIP11.91□□□□□ -0.52e-6■■■■□ 23.1
TRA2A-209ENST00000494255 MUM1Q2TAK8 710 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 PRTGQ2VWP7 1150 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 ATG9BQ674R7 924 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 METTL2BQ6P1Q9 378 aaKnown RBP11.91□□□□□ -0.5
TRA2A-209ENST00000494255 SLCO4C1Q6ZQN7 724 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 TTLL10Q6ZVT0 673 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 VASH2Q86V25 355 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 DSELQ8IZU8 1212 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 KRT78Q8N1N4 520 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 TEX9Q8N6V9 391 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 MFSD9Q8NBP5 474 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 SLC38A9Q8NBW4 561 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 CAMKVQ8NCB2 501 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 DPH2Q9BQC3 489 aaPredicted RBP11.91□□□□□ -0.5
TRA2A-209ENST00000494255 EHD1Q9H4M9 534 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 GPN2Q9H9Y4 310 aaPredicted RBP11.91□□□□□ -0.5
TRA2A-209ENST00000494255 ENAMQ9NRM1 1142 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 DHCR7Q9UBM7 475 aaKnown RBP11.91□□□□□ -0.5
TRA2A-209ENST00000494255 GRID1Q9ULK0 1009 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 ASB1Q9Y576 335 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 PCDHGA4Q9Y5G9 962 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 APC2O95996 2303 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 A0A1B0GX78 115 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 DSCR3O14972 297 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 RGS16O15492 202 aaPredicted RBP11.91□□□□□ -0.5
TRA2A-209ENST00000494255 LCMT2O60294 686 aaKnown RBP11.91□□□□□ -0.5
TRA2A-209ENST00000494255 KATNA1O75449 491 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 SLC35G6P0C7Q6 338 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 VARSP26640 1264 aaKnown RBP11.91□□□□□ -0.5
TRA2A-209ENST00000494255 EEF1DP29692 281 aaKnown RBP11.91□□□□□ -0.5
TRA2A-209ENST00000494255 RORAP35398 523 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 EMP3P54852 163 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 TLE3Q04726 772 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 ZNF844Q08AG5 666 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 LAPTM5Q13571 262 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 RBBP5Q15291 538 aaKnown RBP11.91□□□□□ -0.5
TRA2A-209ENST00000494255 NDUFA9Q16795 377 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 CCDC153Q494R4 210 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 XKR6Q5GH73 641 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 CEP85LQ5SZL2 805 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 C1orf189Q5VU69 101 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 C16orf46Q6P387 395 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 LRIG3Q6UXM1 1119 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 ASPGQ86U10 573 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 TRABD2AQ86V40 505 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 SRRM1Q8IYB3 904 aaKnown RBP11.91□□□□□ -0.5
TRA2A-209ENST00000494255 IQCKQ8N0W5 287 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 C4orf33Q8N1A6 199 aa11.91□□□□□ -0.5
TRA2A-209ENST00000494255 HNRNPLLQ8WVV9 542 aaKnown RBP11.91□□□□□ -0.5
TRA2A-209ENST00000494255 PTCD3Q96EY7 689 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms