RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 OR2A5Q96R48 311 aa11.14□□□□□ -0.63
UBA3-211ENST00000493957 ATOH8Q96SQ7 321 aa11.14□□□□□ -0.63
UBA3-211ENST00000493957 ZFYVE21Q9BQ24 234 aa11.14□□□□□ -0.63
UBA3-211ENST00000493957 MACROD1Q9BQ69 325 aa11.14□□□□□ -0.63
UBA3-211ENST00000493957 SLC7A5P2Q9GIP4 190 aa11.14□□□□□ -0.63
UBA3-211ENST00000493957 VPS11Q9H270 941 aa11.14□□□□□ -0.63
UBA3-211ENST00000493957 ANKMY1Q9P2S6 941 aa11.14□□□□□ -0.63
UBA3-211ENST00000493957 ZNF180Q9UJW8 692 aa11.14□□□□□ -0.63
UBA3-211ENST00000493957 PADI1Q9ULC6 663 aa11.14□□□□□ -0.63
UBA3-211ENST00000493957 SLC22A14Q9Y267 594 aa11.14□□□□□ -0.63
UBA3-211ENST00000493957 ACOT9Q9Y305 439 aa11.14□□□□□ -0.63
UBA3-211ENST00000493957 PIEZO2Q9H5I5 2752 aa11.14□□□□□ -0.63
UBA3-211ENST00000493957 A0A087X1B8 175 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 PABPN1LA6NDY0 278 aaKnown RBP11.13□□□□□ -0.63
UBA3-211ENST00000493957 SUPT3HB4E1H0 165 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 NKX2-8O15522 239 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 LCMT2O60294 686 aaKnown RBP11.13□□□□□ -0.63
UBA3-211ENST00000493957 CNOT3O75175 753 aaKnown RBP11.13□□□□□ -0.63
UBA3-211ENST00000493957 KATNA1O75449 491 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 SUPT3HO75486 399 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 WDR47O94967 919 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 FURINP09958 794 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 CCNYL3P0C7X3 344 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 PRKAR1AP10644 381 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 TYK2P29597 1187 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 BCL6P41182 706 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 HSPA7P48741 367 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 AGTR2P50052 363 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 SERPINB9P50453 376 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 UCNP55089 124 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 PRSS12P56730 875 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 PRTGQ2VWP7 1150 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 TAF1BQ53T94 588 aaPredicted RBP11.13□□□□□ -0.63
UBA3-211ENST00000493957 RHBDD2Q6NTF9 364 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 VN1R4Q7Z5H5 301 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 C17orf64Q86WR6 236 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 ZNF740Q8NDX6 193 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 UBLCP1Q8WVY7 318 aaPredicted RBP11.13□□□□□ -0.63
UBA3-211ENST00000493957 ATL1Q8WXF7 558 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 STARD8Q92502 1023 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 ISL2Q96A47 359 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 C10orf90Q96M02 699 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 LRFN5Q96NI6 719 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 GBP5Q96PP8 586 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 NMRAL1Q9HBL8 299 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 SLC22A11Q9NSA0 550 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 TMEM184CQ9NVA4 438 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 WWOXQ9NZC7 414 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 CD274Q9NZQ7 290 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 RNF112Q9ULX5 631 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 SNX7Q9UNH6 387 aa11.13□□□□□ -0.63
UBA3-211ENST00000493957 MRPS2Q9Y399 296 aaKnown RBP11.13□□□□□ -0.63
UBA3-211ENST00000493957 FITM1A5D6W6 292 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 LRRC14BA6NHZ5 514 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 PRAMEF4O60810 478 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 RFPL1O75677 317 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 KLHL2O95198 593 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 MT-ND3P03897 115 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 MTHFD2P13995 350 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 EZRP15311 586 aaKnown RBP11.12□□□□□ -0.63
UBA3-211ENST00000493957 CCND1P24385 295 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 VARSP26640 1264 aaKnown RBP11.12□□□□□ -0.63
UBA3-211ENST00000493957 IL10RAQ13651 578 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 NAA25Q14CX7 972 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 PRAMEF9Q5VWM5 478 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 TLDC1Q6P9B6 456 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 TTLL10Q6ZVT0 673 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 COX15Q7KZN9 410 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 GPR155Q7Z3F1 870 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 TMPRSS11BQ86T26 416 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 KLHDC8AQ8IYD2 350 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 SHISA5Q8N114 240 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 ARHGEF39Q8N4T4 335 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 CSNK1A1LQ8N752 337 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 ENDOVQ8N8Q3 282 aaKnown RBP11.12□□□□□ -0.63
UBA3-211ENST00000493957 PDPRQ8NCN5 879 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 MZB1Q8WU39 189 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 SNRNP27Q8WVK2 155 aaKnown RBP11.12□□□□□ -0.63
UBA3-211ENST00000493957 SLC5A11Q8WWX8 675 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 KIAA1143Q96AT1 154 aaPredicted RBP11.12□□□□□ -0.63
UBA3-211ENST00000493957 SLC45A3Q96JT2 553 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 HAUS8Q9BT25 410 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 NDC1Q9BTX1 674 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 PCBD2Q9H0N5 130 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 ACTL8Q9H568 366 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 CUTCQ9NTM9 273 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 TXLNGQ9NUQ3 528 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 NDOR1Q9UHB4 597 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 TBK1Q9UHD2 729 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 PTBP2Q9UKA9 531 aaKnown RBP11.12□□□□□ -0.63
UBA3-211ENST00000493957 TLK1Q9UKI8 766 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 RUVBL1Q9Y265 456 aaKnown RBP11.12□□□□□ -0.63
UBA3-211ENST00000493957 IKBKGQ9Y6K9 419 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 AP1M2Q9Y6Q5 423 aa11.12□□□□□ -0.63
UBA3-211ENST00000493957 HYKKA2RU49 373 aa11.11□□□□□ -0.63
UBA3-211ENST00000493957 SMIM23A6NLE4 172 aa11.11□□□□□ -0.63
UBA3-211ENST00000493957 FFAR3O14843 346 aa11.11□□□□□ -0.63
UBA3-211ENST00000493957 DSCR3O14972 297 aa11.11□□□□□ -0.63
UBA3-211ENST00000493957 GPR42O15529 346 aa11.11□□□□□ -0.63
UBA3-211ENST00000493957 SRPX2O60687 465 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms