RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 PAQR7Q86WK9 346 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 D2HGDHQ8N465 521 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 L3MBTL4Q8NA19 623 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 TTC29Q8NA56 475 aaPredicted RBP14.32□□□□□ -0.12
ACTB-213ENST00000493945 CAMKVQ8NCB2 501 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 TRPV3Q8NET8 790 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 FLVCR1-AS1Q8TAF5 88 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 ADAMTS14Q8WXS8 1223 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 KLHL6Q8WZ60 621 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 SLC41A2Q96JW4 573 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 MAGEB18Q96M61 343 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 ILKAPQ9H0C8 392 aaPredicted RBP14.32□□□□□ -0.12
ACTB-213ENST00000493945 GSTO2Q9H4Y5 243 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 SLC6A20Q9NP91 592 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 NMRK1Q9NWW6 199 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 TOR4AQ9NXH8 423 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.32□□□□□ -0.12
ACTB-213ENST00000493945 DMDP11532 3685 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 CNOT1A5YKK6 2376 aaKnown RBP14.31□□□□□ -0.12
ACTB-213ENST00000493945 WDR87Q6ZQQ6 2873 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 A0A088AWK7 358 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 IGHV5-51A0A0C4DH38 117 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 SLCO1B7G3V0H7 640 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 H0YIV9 168 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 JMJD7P0C870 316 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 HOXB3P14651 431 aaPredicted RBP14.31□□□□□ -0.12
ACTB-213ENST00000493945 ZNF10P21506 573 aaPredicted RBP14.31□□□□□ -0.12
ACTB-213ENST00000493945 SLC1A6P48664 564 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 PPP1CAP62136 330 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 CSNK1G2P78368 415 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 TRAF3Q13114 568 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 DOC2AQ14183 400 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 RBBP5Q15291 538 aaKnown RBP14.31□□□□□ -0.12
ACTB-213ENST00000493945 TMEM164Q5U3C3 297 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 ZCCHC23Q6ZST2 131 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 RNF44Q7L0R7 432 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 CUZD1Q86UP6 607 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 FAM129CQ86XR2 697 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 CRLF3Q8IUI8 442 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 OR4K1Q8NGD4 311 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 MDM1Q8TC05 714 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 METTL6Q8TCB7 284 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 AGAP11Q8TF27 550 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 NSUN5Q96P11 429 aaKnown RBP14.31□□□□□ -0.12
ACTB-213ENST00000493945 TEFMQ96QE5 360 aaKnown RBP14.31□□□□□ -0.12
ACTB-213ENST00000493945 CCT7Q99832 543 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 ZPBPQ9BS86 351 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 SARGQ9BW04 601 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 SLC7A5P2Q9GIP4 190 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 CUEDC1Q9NWM3 386 aaPredicted RBP14.31□□□□□ -0.12
ACTB-213ENST00000493945 DLL3Q9NYJ7 618 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 SERTAD3Q9UJW9 196 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 RARRES3Q9UL19 164 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 ASB1Q9Y576 335 aa14.31□□□□□ -0.12
ACTB-213ENST00000493945 LRRC14BA6NHZ5 514 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 ZSCAN9O15535 394 aaPredicted RBP14.3□□□□□ -0.12
ACTB-213ENST00000493945 OR1F1O43749 312 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 WFS1O76024 890 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 HBQ1P09105 142 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 UROSP10746 265 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 PCNAP12004 261 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 HSD3B1P14060 373 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 PVRP15151 417 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 MPSTP25325 297 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 HSD3B2P26439 372 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 STXBP1P61764 594 aaKnown RBP14.3□□□□□ -0.12
ACTB-213ENST00000493945 CFHR1Q03591 330 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 TUBB3Q13509 450 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 E2F2Q14209 437 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 IL11RAQ14626 422 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 CPSF6Q16630 551 aaKnown RBP eCLIP14.3□□□□□ -0.12
ACTB-213ENST00000493945 NDUFA9Q16795 377 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 ZXDCQ2QGD7 858 aaPredicted RBP14.3□□□□□ -0.12
ACTB-213ENST00000493945 ARL13AQ5H913 290 aaPredicted RBP14.3□□□□□ -0.12
ACTB-213ENST00000493945 MANEAQ5SRI9 462 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 CATSPEREQ5SY80 951 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 YOD1Q5VVQ6 348 aaPredicted RBP14.3□□□□□ -0.12
ACTB-213ENST00000493945 TLDC1Q6P9B6 456 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 DCBLD1Q8N8Z6 715 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 MFSD9Q8NBP5 474 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 SRFBP1Q8NEF9 429 aaKnown RBP14.3□□□□□ -0.12
ACTB-213ENST00000493945 OR4F6Q8NGB9 312 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 OR52B6Q8NGF0 335 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 WDR36Q8NI36 951 aaKnown RBP14.3□□□□□ -0.12
ACTB-213ENST00000493945 CKAP2Q8WWK9 683 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 ZBTB26Q9HCK0 441 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 GEMIN8Q9NWZ8 242 aaKnown RBP14.3□□□□□ -0.12
ACTB-213ENST00000493945 TMEM9Q9P0T7 183 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 ZFP69BQ9UJL9 534 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 SRPK3Q9UPE1 567 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 RAP2CQ9Y3L5 183 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 TSC22D4Q9Y3Q8 395 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 AP1M2Q9Y6Q5 423 aa14.3□□□□□ -0.12
ACTB-213ENST00000493945 MDC1Q14676 2089 aaKnown RBP14.29□□□□□ -0.12
ACTB-213ENST00000493945 KCNE1BA0A087WTH5 132 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 A0A0J9YVX5 310 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 B4E171 279 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 OR7A17O14581 309 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 HAT1O14929 419 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 AZIN1O14977 448 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms