RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 LIPGQ9Y5X9 500 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 SMAD5-AS1Q9Y6J3 95 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 A0A087WV48 116 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 SHISA7A6NL88 538 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 K7EQD1 137 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 GSRP00390 522 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 CCDC175P0C221 793 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 PRKAR1AP10644 381 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 ZNF10P21506 573 aaPredicted RBP3.53□□□□□ -1.84
ITGB1-216ENST00000493758 EDNRAP25101 427 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 PSMA3P25788 255 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 ELAVL4P26378 380 aaKnown RBP3.53□□□□□ -1.84
ITGB1-216ENST00000493758 SHC1P29353 583 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 HSD17B3P37058 310 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 OR1D5P58170 312 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 IRX6P78412 446 aaPredicted RBP3.53□□□□□ -1.84
ITGB1-216ENST00000493758 CACNG1Q06432 222 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 RASGEF1BQ0VAM2 473 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 RIGQ13278 110 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 PRPF4BQ13523 1007 aaKnown RBP3.53□□□□□ -1.84
ITGB1-216ENST00000493758 COG2Q14746 738 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 PRSS55Q6UWB4 352 aaPredicted RBP3.53□□□□□ -1.84
ITGB1-216ENST00000493758 ANKRD33Q7Z3H0 272 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 ZFAND4Q86XD8 727 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 PHC2Q8IXK0 858 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 SPEM1Q8N4L4 309 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 Q8NBF4 154 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 C17orf47Q8NEP4 570 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 SNRNP27Q8WVK2 155 aaKnown RBP3.53□□□□□ -1.84
ITGB1-216ENST00000493758 TSACCQ96A04 125 aaPredicted RBP3.53□□□□□ -1.84
ITGB1-216ENST00000493758 RMDN1Q96DB5 314 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 PARLQ9H300 379 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 SLC7A10Q9NS82 523 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.53□□□□□ -1.84
ITGB1-216ENST00000493758 NUDT4Q9NZJ9 180 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 THEGQ9P2T0 379 aa3.53□□□□□ -1.84
ITGB1-216ENST00000493758 MTMR11A4FU01 709 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 PLOD3O60568 738 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 AADACP22760 399 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 CDC25CP30307 473 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 HOXC13P31276 330 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 HSPA4P34932 840 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 SOX3P41225 446 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 PTGER3P43115 390 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 LBX1P52954 281 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 DCDC1P59894 354 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 KRTAP10-3P60369 221 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 RAPSNQ13702 412 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 TCTEX1D4Q5JR98 221 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 KRBOX4Q5JUW0 171 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 FAM182AQ5T1J6 154 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 MFSD4BQ5TF39 518 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 ENPP7Q6UWV6 458 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 C3P1Q6ZMU1 363 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 SLC24A5Q71RS6 500 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 CCDC186Q7Z3E2 898 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 CPEB2Q7Z5Q1 589 aaKnown RBP3.52□□□□□ -1.85
ITGB1-216ENST00000493758 ZER1Q7Z7L7 766 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 C9orf43Q8TAL5 461 aaPredicted RBP3.52□□□□□ -1.85
ITGB1-216ENST00000493758 METTL21AQ8WXB1 218 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 OMA1Q96E52 524 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 C2orf48Q96LS8 159 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 AGAP4Q96P64 663 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 KLHL5Q96PQ7 755 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 BTBD9Q96Q07 612 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 GAL3ST4Q96RP7 486 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 DCTN5Q9BTE1 182 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 FN3KQ9H479 309 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 RAVER2Q9HCJ3 691 aaKnown RBP3.52□□□□□ -1.85
ITGB1-216ENST00000493758 LNPEPQ9UIQ6 1025 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 MOB4Q9Y3A3 225 aa3.52□□□□□ -1.85
ITGB1-216ENST00000493758 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 C17orf105B2RV13 164 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 PI4K2BG5E9Z4 385 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 SLC1A7O00341 560 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 TFECO14948 347 aaPredicted RBP3.51□□□□□ -1.85
ITGB1-216ENST00000493758 SURF4O15260 269 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 NXPH4O95158 308 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 GGPS1O95749 300 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 DNTTP04053 509 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 MYL6BP14649 208 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 ERCC2P18074 760 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 EPORP19235 508 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 PGFP49763 221 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 TMEM132DQ14C87 1099 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 TOMM20Q15388 145 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 LACTB2Q53H82 288 aaPredicted RBP3.51□□□□□ -1.85
ITGB1-216ENST00000493758 C6orf136Q5SQH8 315 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 CES4AQ5XG92 561 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 ZNF343Q6P1L6 599 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 GDPGP1Q6ZNW5 385 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 ERN2Q76MJ5 926 aaKnown RBP3.51□□□□□ -1.85
ITGB1-216ENST00000493758 AQP11Q8NBQ7 271 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 SLC4A11Q8NBS3 891 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 CAMKVQ8NCB2 501 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 OR4D10Q8NGI6 311 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 MIPOL1Q8TD10 442 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 SLC45A3Q96JT2 553 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 EGLN3Q9H6Z9 239 aa3.51□□□□□ -1.85
ITGB1-216ENST00000493758 TBC1D13Q9NVG8 400 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms