RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 TAB3Q8N5C8 712 aaPredicted RBP13.43□□□□□ -0.26
PRPF40A-211ENST00000493468 POGLUT1Q8NBL1 392 aa13.43□□□□□ -0.26
PRPF40A-211ENST00000493468 MAGEC3Q8TD91 643 aa13.43□□□□□ -0.26
PRPF40A-211ENST00000493468 NRGNQ92686 78 aa13.43□□□□□ -0.26
PRPF40A-211ENST00000493468 RERGQ96A58 199 aaPredicted RBP13.43□□□□□ -0.26
PRPF40A-211ENST00000493468 OR2A5Q96R48 311 aa13.43□□□□□ -0.26
PRPF40A-211ENST00000493468 KCNJ16Q9NPI9 418 aa13.43□□□□□ -0.26
PRPF40A-211ENST00000493468 CCM2LQ9NUG4 571 aaPredicted RBP13.43□□□□□ -0.26
PRPF40A-211ENST00000493468 SPTLC3Q9NUV7 552 aa13.43□□□□□ -0.26
PRPF40A-211ENST00000493468 GNPTGQ9UJJ9 305 aa13.43□□□□□ -0.26
PRPF40A-211ENST00000493468 RIMKLBQ9ULI2 386 aa13.43□□□□□ -0.26
PRPF40A-211ENST00000493468 RNF6Q9Y252 685 aa13.43□□□□□ -0.26
PRPF40A-211ENST00000493468 IGHV3-20A0A0C4DH32 117 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 A0A0U1RQJ8 604 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 NKX2-6A6NCS4 301 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 IQCF5A8MTL0 148 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 SLC25A12O75746 678 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 ZWINTO95229 277 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 GOT2P00505 430 aaKnown RBP13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 EZRP15311 586 aaKnown RBP13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 PTGER1P34995 402 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 PTPN7P35236 360 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 PTGS2P35354 604 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 AVPR1BP47901 424 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 YBX1P67809 324 aaKnown RBP13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 TPM4P67936 248 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 MAT1AQ00266 395 aaKnown RBP13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 OC90Q02509 493 aaPredicted RBP13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 ACVR1Q04771 509 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 PTK6Q13882 451 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 NDUFA9Q16795 377 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 CCSMST1Q4G0I0 132 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 ZNF425Q6IV72 752 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 CEP128Q6ZU80 1094 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 ANKRD37Q7Z713 158 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 CD163Q86VB7 1156 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 OR8K1Q8NGG5 319 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 GSDMBQ8TAX9 411 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 RND1Q92730 232 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 ALPK1Q96QP1 1244 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 TP63Q9H3D4 680 aaPredicted RBP13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 GSX1Q9H4S2 264 aaPredicted RBP13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 TRIM45Q9H8W5 580 aaPredicted RBP13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 MRPS30Q9NP92 439 aaKnown RBP13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 UTP6Q9NYH9 597 aaKnown RBP13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 LRFN1Q9P244 771 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 ST6GALNAC2Q9UJ37 374 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 TTC7AQ9ULT0 858 aaPredicted RBP13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 NFS1Q9Y697 457 aa13.42□□□□□ -0.26
PRPF40A-211ENST00000493468 DNAJC13O75165 2243 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 IGKV1-8A0A0C4DH67 115 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 MACROD2A1Z1Q3 448 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 SOWAHDA6NJG2 315 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 FAM90A27PA6NNH2 459 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 KPNA5O15131 536 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 MAN1A2O60476 641 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 NSA2O95478 260 aaKnown RBP13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 TPOP07202 933 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 CTNNA2P26232 953 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 TAS2R50P59544 299 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 MYBPHQ13203 477 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 P3H1Q32P28 736 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 MINDY4Q4G0A6 757 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 AARS2Q5JTZ9 985 aaKnown RBP13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 ZNF534Q76KX8 674 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 CLYBLQ8N0X4 340 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 CPSF7Q8N684 471 aaKnown RBP13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 OR4L1Q8NH43 312 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 KRT35Q92764 455 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 CCDC42Q96M95 316 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 FOPNLQ96NB1 174 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 GBP4Q96PP9 640 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 PANX3Q96QZ0 392 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 UCK2Q9BZX2 261 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 GOLPH3Q9H4A6 298 aa13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 ZNHIT6Q9NWK9 470 aaKnown RBP13.41□□□□□ -0.26
PRPF40A-211ENST00000493468 KRT87PA6NCN2 255 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 PRMT5O14744 637 aaPredicted RBP13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 P2RX6O15547 441 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 PSMD3O43242 534 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 KLK8O60259 260 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 CCNDBP1O95273 360 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 METTL18O95568 372 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 TRIM14Q14142 442 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 SEMA3AQ14563 771 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 ARHGAP19Q14CB8 494 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 MAPKAPK3Q16644 382 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 CCDC38Q502W7 563 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 FASTKD1Q53R41 847 aaKnown RBP13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 TSTD2Q5T7W7 516 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 C11orf63Q6NUN7 778 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 PAPD4Q6PIY7 484 aaKnown RBP13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 LINC00523Q86TU6 105 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 BIVMQ86UB2 503 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 KRT222Q8N1A0 295 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 MYRIPQ8NFW9 859 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 SMPDL3AQ92484 453 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 PEX13Q92968 403 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 ACAT2Q9BWD1 397 aa13.4□□□□□ -0.26
PRPF40A-211ENST00000493468 NHEJ1Q9H9Q4 299 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms