RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 RUVBL1Q9Y265 456 aaKnown RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 MRPS2Q9Y399 296 aaKnown RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 LOC102723996A0A087X1L8 192 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 TRAV17A0A0B4J275 112 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 ZCWPW2A0A1B0GU75 182 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 A0A1B0GUH1 482 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 IDSB3KWA1 339 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 NDC80O14777 642 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 AVILO75366 819 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 NSA2O95478 260 aaKnown RBP8.32□□□□□ -1.08
NUP50-217ENST00000491860 RNF224P0DH78 156 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 ATXN8OSP0DMR3 200 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 COX6A1P12074 109 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 IL10P22301 178 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 DCTP40126 519 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 SLC1A2P43004 574 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 AGTR2P50052 363 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 ARG2P78540 354 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 CCZ1BP86790 482 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 CCZ1P86791 482 aaPredicted RBP8.32□□□□□ -1.08
NUP50-217ENST00000491860 CTBP1Q13363 440 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 MRPL49Q13405 166 aaKnown RBP8.32□□□□□ -1.08
NUP50-217ENST00000491860 PPP1R7Q15435 360 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 PRR30Q53SZ7 412 aaPredicted RBP8.32□□□□□ -1.08
NUP50-217ENST00000491860 ANKRD22Q5VYY1 191 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 GALNT7Q86SF2 657 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 KCNMB4Q86W47 210 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 SLC34A3Q8N130 599 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 MYO1HQ8N1T3 1032 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 METTL27Q8N6F8 245 aaPredicted RBP8.32□□□□□ -1.08
NUP50-217ENST00000491860 NAT8LQ8N9F0 302 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 FAR1Q8WVX9 515 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.32□□□□□ -1.08
NUP50-217ENST00000491860 ATL1Q8WXF7 558 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 FAM136AQ96C01 138 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 C19orf60Q96EN9 201 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 CNDP1Q96KN2 507 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 GPR21Q99679 349 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 TRIM56Q9BRZ2 755 aaKnown RBP8.32□□□□□ -1.08
NUP50-217ENST00000491860 HAUS8Q9BT25 410 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 TRIM54Q9BYV2 358 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 ZNF160Q9HCG1 818 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 FBXO6Q9NRD1 293 aaPredicted RBP8.32□□□□□ -1.08
NUP50-217ENST00000491860 PCYOX1Q9UHG3 505 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 FBXO5Q9UKT4 447 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 ZGRF1Q86YA3 2104 aa8.32□□□□□ -1.08
NUP50-217ENST00000491860 SVILO95425 2214 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 IGHV1-45A0A0A0MS14 117 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 MLYCDO95822 493 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 LDLRP01130 860 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 CRYABP02511 175 aaKnown RBP8.31□□□□□ -1.08
NUP50-217ENST00000491860 ENO2P09104 434 aaPredicted RBP8.31□□□□□ -1.08
NUP50-217ENST00000491860 SLC35G6P0C7Q6 338 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 PRR35P0CG20 571 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 C8orf89P0DMQ9 161 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 ELAVL4P26378 380 aaKnown RBP8.31□□□□□ -1.08
NUP50-217ENST00000491860 IMPA1P29218 277 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 AP1S2P56377 157 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 HIF1AQ16665 826 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.31□□□□□ -1.08
NUP50-217ENST00000491860 HKDC1Q2TB90 917 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 HSP90AA5PQ58FG0 334 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 VWA2Q5GFL6 755 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 SPANXN3Q5MJ09 141 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 ZNF787Q6DD87 383 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 TTC27Q6P3X3 843 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 TMEM205Q6UW68 189 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 CYHR1Q6ZMK1 362 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 SHISA6Q6ZSJ9 500 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 SYDE1Q6ZW31 735 aaPredicted RBP8.31□□□□□ -1.08
NUP50-217ENST00000491860 DENND6AQ8IWF6 608 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 CNTN4Q8IWV2 1026 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 LRRC56Q8IYG6 542 aaPredicted RBP8.31□□□□□ -1.08
NUP50-217ENST00000491860 C2CD4AQ8NCU7 369 aaPredicted RBP8.31□□□□□ -1.08
NUP50-217ENST00000491860 DNAJB8Q8NHS0 232 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 CD200R1Q8TD46 325 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 HAS2Q92819 552 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 LRRC39Q96DD0 335 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 SIGLEC10Q96LC7 697 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 AARSD1Q9BTE6 412 aaKnown RBP8.31□□□□□ -1.08
NUP50-217ENST00000491860 ZNF700Q9H0M5 742 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 CLK4Q9HAZ1 481 aaKnown RBP8.31□□□□□ -1.08
NUP50-217ENST00000491860 PARVBQ9HBI1 364 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 ZBTB20Q9HC78 741 aaPredicted RBP8.31□□□□□ -1.08
NUP50-217ENST00000491860 ANKHQ9HCJ1 492 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 ABI3Q9P2A4 366 aa8.31□□□□□ -1.08
NUP50-217ENST00000491860 TSR3Q9UJK0 312 aaKnown RBP8.31□□□□□ -1.08
NUP50-217ENST00000491860 ERRFI1Q9UJM3 462 aaPredicted RBP8.31□□□□□ -1.08
NUP50-217ENST00000491860 DIDO1Q9BTC0 2240 aaKnown RBP8.31□□□□□ -1.08
NUP50-217ENST00000491860 OTOGQ6ZRI0 2925 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 A0A0A6YYC8 382 aaPredicted RBP8.3□□□□□ -1.08
NUP50-217ENST00000491860 IGKV1-8A0A0C4DH67 115 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 URADA6NGE7 173 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 GOLGA8MH3BSY2 632 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 H7BY64 318 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 I3L1I5 382 aaPredicted RBP8.3□□□□□ -1.08
NUP50-217ENST00000491860 DNALI1O14645 258 aaPredicted RBP8.3□□□□□ -1.08
NUP50-217ENST00000491860 HAT1O14929 419 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 ALOX12BO75342 701 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 TCP1P17987 556 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms