RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 CCDC177Q9NQR7 707 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-216ENST00000490796 OLAHQ9NV23 265 aa18.73■□□□□ 0.59
SREBF1-216ENST00000490796 TRMT6Q9UJA5 497 aaKnown RBP18.73■□□□□ 0.59
SREBF1-216ENST00000490796 MKL2Q9ULH7 1088 aa18.73■□□□□ 0.59
SREBF1-216ENST00000490796 MRPS2Q9Y399 296 aaKnown RBP18.73■□□□□ 0.59
SREBF1-216ENST00000490796 JRKLQ9Y4A0 524 aa18.73■□□□□ 0.59
SREBF1-216ENST00000490796 CACNA1DQ01668 2161 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 TRAV17A0A0B4J275 112 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 ZCWPW2A0A1B0GU75 182 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 H7BY64 318 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 HAT1O14929 419 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 LRRTM2O43300 516 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 BMP10O95393 424 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 CLDN1O95832 211 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 ICAM2P13598 275 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 HRH2P25021 359 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 COL8A1P27658 744 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 RGS4P49798 205 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 PTK6Q13882 451 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 FAM53BQ14153 422 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 LRRC8EQ6NSJ5 796 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 RIPOR1Q6ZS17 1223 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 ZGRF1Q86YA3 2104 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 CPNE9Q8IYJ1 553 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 AMER3Q8N944 861 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.72■□□□□ 0.59
SREBF1-216ENST00000490796 MS4A14Q96JA4 679 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 PRAP1Q96NZ9 151 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 TGIF2Q9GZN2 237 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 PLA2G3Q9NZ20 509 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 FBXO5Q9UKT4 447 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 MYO9AB2RTY4 2548 aa18.72■□□□□ 0.59
SREBF1-216ENST00000490796 IGHV1-45A0A0A0MS14 117 aa18.71■□□□□ 0.59
SREBF1-216ENST00000490796 GOLGA6L10A0A0M3HER8 536 aa18.71■□□□□ 0.59
SREBF1-216ENST00000490796 PABPN1LA6NDY0 278 aaKnown RBP18.71■□□□□ 0.59
SREBF1-216ENST00000490796 GFYI3L273 518 aa18.71■□□□□ 0.59
SREBF1-216ENST00000490796 MYBL2P10244 700 aa18.71■□□□□ 0.59
SREBF1-216ENST00000490796 RPS15AP62244 130 aaKnown RBP18.71■□□□□ 0.59
SREBF1-216ENST00000490796 SYT16Q17RD7 645 aa18.71■□□□□ 0.59
SREBF1-216ENST00000490796 HSP90AA5PQ58FG0 334 aa18.71■□□□□ 0.59
SREBF1-216ENST00000490796 ZNF787Q6DD87 383 aa18.71■□□□□ 0.59
SREBF1-216ENST00000490796 RPUSD3Q6P087 351 aaKnown RBP18.71■□□□□ 0.59
SREBF1-216ENST00000490796 ZNF549Q6P9A3 640 aa18.71■□□□□ 0.59
SREBF1-216ENST00000490796 PIWIL4Q7Z3Z4 852 aaKnown RBP18.71■□□□□ 0.59
SREBF1-216ENST00000490796 RASGEF1CQ8N431 466 aa18.71■□□□□ 0.59
SREBF1-216ENST00000490796 SUN3Q8TAQ9 357 aa18.71■□□□□ 0.59
SREBF1-216ENST00000490796 PCBD2Q9H0N5 130 aa18.71■□□□□ 0.59
SREBF1-216ENST00000490796 IARS2Q9NSE4 1012 aaKnown RBP18.71■□□□□ 0.59
SREBF1-216ENST00000490796 TMEM184CQ9NVA4 438 aa18.71■□□□□ 0.59
SREBF1-216ENST00000490796 PGRMC1O00264 195 aaKnown RBP18.7■□□□□ 0.58
SREBF1-216ENST00000490796 EIF3FO00303 357 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-216ENST00000490796 P2RX6O15547 441 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 FOXS1O43638 330 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 HAUS5O94927 633 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 STATHP02808 62 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 C8orf89P0DMQ9 161 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 IMPA1P29218 277 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 SKIV2L2P42285 1042 aaKnown RBP18.7■□□□□ 0.58
SREBF1-216ENST00000490796 MPP1Q00013 466 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 MAT1AQ00266 395 aaKnown RBP18.7■□□□□ 0.58
SREBF1-216ENST00000490796 MINDY4Q4G0A6 757 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 ABHD17BQ5VST6 288 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 CYHR1Q6ZMK1 362 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 LURAP1LQ8IV03 231 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 ZC3H7AQ8IWR0 971 aaKnown RBP18.7■□□□□ 0.58
SREBF1-216ENST00000490796 PPIL6Q8IXY8 311 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 CD200R1Q8TD46 325 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 ALKBH8Q96BT7 664 aaKnown RBP18.7■□□□□ 0.58
SREBF1-216ENST00000490796 CCDC138Q96M89 665 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 AARSD1Q9BTE6 412 aaKnown RBP18.7■□□□□ 0.58
SREBF1-216ENST00000490796 TUBB6Q9BUF5 446 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 ZNF700Q9H0M5 742 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 C19orf25Q9UFG5 118 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-216ENST00000490796 TEKT2Q9UIF3 430 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 MED16Q9Y2X0 877 aa18.7■□□□□ 0.58
SREBF1-216ENST00000490796 H0YIG0 161 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 E2F3O00716 465 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 JRKO75564 520 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 GRK3P35626 688 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 SOX11P35716 441 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 DCTP40126 519 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 TNFSF10P50591 281 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 TBPL1P62380 186 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 CCZ1BP86790 482 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 CCZ1P86791 482 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-216ENST00000490796 PPP1R7Q15435 360 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 C17orf64Q86WR6 236 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 MYO1HQ8N1T3 1032 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 CAMKVQ8NCB2 501 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 OR9A4Q8NGU2 314 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 PSMF1Q92530 271 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 HAS2Q92819 552 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 THAP11Q96EK4 314 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 SYNPO2LQ9H987 977 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 TAS2R13Q9NYV9 303 aa18.69■□□□□ 0.58
SREBF1-216ENST00000490796 LOC102723996A0A087X1L8 192 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 A0A1B0GUH1 482 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 A0A1W2PQ72 361 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 F10P00742 488 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 C8GP07360 202 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms