RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 APOL2Q9BQE5 337 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 SMARCAL1Q9NZC9 954 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 KLHL8Q9P2G9 620 aaPredicted RBP12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 IMPACTQ9P2X3 320 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 SAE1Q9UBE0 346 aaPredicted RBP12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 KLF13Q9Y2Y9 288 aaPredicted RBP12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 KLK4Q9Y5K2 254 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 A0A0U1RQJ8 604 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 SOWAHDA6NJG2 315 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 C3orf70A6NLC5 250 aaPredicted RBP12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 KLRC4-KLRK1H3BQV0 150 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 FKBP9O95302 570 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 F12P00748 615 aaPredicted RBP12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 FTH1P02794 183 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 CYP1A2P05177 515 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 TAS2R50P59544 299 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 GPR85P60893 370 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 KLHL30Q0D2K2 578 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 DNAJC21Q5F1R6 531 aaKnown RBP12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 PAPD4Q6PIY7 484 aaKnown RBP12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 PID1Q7Z2X4 250 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 PIANPQ8IYJ0 282 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 LGI4Q8N135 537 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 ZNF567Q8N184 647 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 KIF2BQ8N4N8 673 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 ARHGEF39Q8N4T4 335 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 CSNK1A1LQ8N752 337 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 ENOX1Q8TC92 643 aaKnown RBP12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 DRC3Q9H069 523 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 TRIM45Q9H8W5 580 aaPredicted RBP12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 SLC39A10Q9ULF5 831 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 MYO6Q9UM54 1294 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 EML6Q6ZMW3 1958 aa12.83□□□□□ -0.36
EXOSC3-207ENST00000490516 A0A1W2PPR1 153 aa12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 OR2A25A4D2G3 310 aa12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 KRT87PA6NCN2 255 aa12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 CRTAMO95727 393 aa12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 TYRO3Q06418 890 aa12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 MSLNQ13421 630 aaPredicted RBP12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 POU4F3Q15319 338 aa12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 SFT2D3Q587I9 215 aa12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 DCUN1D3Q8IWE4 304 aa12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 ZFP62Q8NB50 900 aaPredicted RBP12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 OR2A1Q8NGT9 310 aa12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 ZNF592Q92610 1267 aa12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 DNAJC1Q96KC8 554 aaKnown RBP12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 SH3GL2Q99962 352 aa12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 GORASP1Q9BQQ3 440 aa12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 DPH7Q9BTV6 452 aa12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 MAK16Q9BXY0 300 aaKnown RBP12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 RTN4Q9NQC3 1192 aaKnown RBP12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 LIMA1Q9UHB6 759 aaKnown RBP12.82□□□□□ -0.36
EXOSC3-207ENST00000490516 FIGNL2A6NMB9 653 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 SLC16A5O15375 505 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 PROSCO94903 275 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 EPXP11678 715 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 AGTR2P50052 363 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 HLCSP50747 726 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 ACTN3Q08043 901 aaPredicted RBP12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 USP10Q14694 798 aaKnown RBP12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 FILIP1LQ4L180 1135 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 KAZNQ674X7 775 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 PAOXQ6QHF9 649 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 RANBP10Q6VN20 620 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 CAPN12Q6ZSI9 719 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 YTHDF3Q7Z739 585 aaKnown RBP12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 RFX6Q8HWS3 928 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 SLC22A15Q8IZD6 547 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 RELL2Q8NC24 303 aaPredicted RBP12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 OR9A4Q8NGU2 314 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 TFB1MQ8WVM0 346 aaKnown RBP12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 SPATA13Q96N96 652 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 AIPL1Q9NZN9 384 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 RSPH14Q9UHP6 348 aa12.81□□□□□ -0.36
EXOSC3-207ENST00000490516 A0A1W2PPV9 198 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 CLCA1A8K7I4 914 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 FAM166BA8MTA8 275 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 ARHGEF33A8MVX0 844 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 HAX1O00165 279 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 P2RX6O15547 441 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 SMPD2O60906 423 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 TRHRP34981 398 aaPredicted RBP12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 MLF1P58340 268 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 SLC26A5P58743 744 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 PLOD1Q02809 727 aaPredicted RBP12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 CCSMST1Q4G0I0 132 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 GARNL3Q5VVW2 1013 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 PODNL1Q6PEZ8 512 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 MDGA2Q7Z553 956 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 LRRC75A-AS1Q8N1F1 130 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 LINC01560Q8TB33 94 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 ELP5Q8TE02 316 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 SMC6Q96SB8 1091 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 LPAR4Q99677 370 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 ACAT2Q9BWD1 397 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 LIPGQ9Y5X9 500 aa12.8□□□□□ -0.36
EXOSC3-207ENST00000490516 PINLYPA6NC86 204 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 TUBAL3A6NHL2 446 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 ZNF487B1APH4 448 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 CDK2AP1O14519 115 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms