RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, human

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-208	ENST00000490476	ZBTB49	Q6ZSB9	765 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	MFSD6	Q6ZSS7	791 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	MFN1	Q8IWA4	741 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	GCSAM	Q8N6F7	178 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	IQUB	Q8NA54	791 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	SLC38A9	Q8NBW4	561 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	OR2AJ1	Q8NGZ0	328 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	PPP4R1	Q8TF05	950 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	QRFPR	Q96P65	431 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	MS4A10	Q96PG2	267 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	CITED2	Q99967	270 aa	Predicted RBP	4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	SLC25A23	Q9BV35	468 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	ANKZF1	Q9H8Y5	726 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	EQTN	Q9NQ60	294 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	PIH1D3	Q9NQM4	214 aa	Known RBP	4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	CHCHD3	Q9NX63	227 aa	Known RBP	4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	RCC2	Q9P258	522 aa	Known RBP	4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	RASAL2	Q9UJF2	1139 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	KCNS2	Q9ULS6	477 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	COL4A2	P08572	1712 aa		4.65	□□□□□ -1.67
SSX2IP-208	ENST00000490476	TRAV34	A0A0B4J273	112 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	GOLGA6L9	A6NEM1	432 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	XRCC3	O43542	346 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	FLOT1	O75955	427 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	KDM4B	O94953	1096 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	CLDN14	O95500	239 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	LINGO3	P0C6S8	592 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	CCDC192	P0DO97	292 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	SRC	P12931	536 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	ACHE	P22303	614 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	ZNF75D	P51815	510 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	POLG	P54098	1239 aa	Predicted RBP	4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	ISL1	P61371	349 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	BNC1	Q01954	994 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476		Q0VFX4	171 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	HSPB3	Q12988	150 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	HNRNPD	Q14103	355 aa	Known RBP	4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	OASL	Q15646	514 aa	Known RBP	4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	CAVIN4	Q5BKX8	364 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	ZNF425	Q6IV72	752 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	ERN2	Q76MJ5	926 aa	Known RBP	4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	ATG9A	Q7Z3C6	839 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	TECPR1	Q7Z6L1	1165 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	GLCCI1	Q86VQ1	547 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	IQCA1	Q86XH1	822 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	CCAR2	Q8N163	923 aa	Known RBP	4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	C1orf52	Q8N6N3	182 aa	Known RBP	4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	ACER1	Q8TDN7	264 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	DEPDC1B	Q8WUY9	529 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	TMED6	Q8WW62	240 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	SPAG5	Q96R06	1193 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	OR6C1	Q96RD1	312 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	FNBP1	Q96RU3	617 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	C16orf70	Q9BSU1	422 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	ABHD6	Q9BV23	337 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	SLITRK6	Q9H5Y7	841 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	OCIAD1	Q9NX40	245 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	C1RL	Q9NZP8	487 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	TMEM184B	Q9Y519	407 aa	Predicted RBP	4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	PTPRC	P08575	1304 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	FLT1	P17948	1338 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	PHLPP2	Q6ZVD8	1323 aa		4.64	□□□□□ -1.67
SSX2IP-208	ENST00000490476	BCLAF3	A2AJT9	711 aa	Known RBP	4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	ANKUB1	A6NFN9	424 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	RSPH10B2	B2RC85	870 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	ANHX	E9PGG2	379 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	TMEM178B	H3BS89	294 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	T	O15178	435 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	TSPAN1	O60635	241 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	MOSPD3	O75425	235 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	PAPSS2	O95340	614 aa	Predicted RBP	4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	SIX3	O95343	332 aa	Predicted RBP	4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	PRSS2	P07478	247 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	RSPH10B	P0C881	870 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	IGHV4-30-4	P0DP06	118 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	TMPO	P42166	694 aa	Known RBP	4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	BTD	P43251	543 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	NR4A2	P43354	598 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	CTSC	P53634	463 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	MRPS21	P82921	87 aa	Known RBP	4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	CDK3	Q00526	305 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	RBPJ	Q06330	500 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	CRYZ	Q08257	329 aa	Known RBP	4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	DSC1	Q08554	894 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	MZT1	Q08AG7	82 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	VWC2	Q2TAL6	325 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	KLHL26	Q53HC5	615 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	EFHC1	Q5JVL4	640 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	DPY19L2P1	Q6NXN4	242 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	RHBDF2	Q6PJF5	856 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	RAD9B	Q6WBX8	426 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	ZNF852	Q6ZMS4	543 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	SNX32	Q86XE0	403 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	MARCH9	Q86YJ5	346 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	ODF3L1	Q8IXM7	274 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	OR52I2	Q8NH67	350 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	EXD1	Q8NHP7	514 aa		4.63	□□□□□ -1.67
SSX2IP-208	ENST00000490476	SPATA20	Q8TB22	786 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms