RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 EGFL8Q99944 293 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 FAM110AQ9BQ89 295 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 GTPBP2Q9BX10 602 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 B3GNT4Q9C0J1 378 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SLC7A5P2Q9GIP4 190 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 WNT5BQ9H1J7 359 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 HIPK3Q9H422 1215 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 RIBC2Q9H4K1 309 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SEBOXQ9HB31 216 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 COX16Q9P0S2 106 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 KCNN3Q9UGI6 736 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 IL17BQ9UHF5 180 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SNX6Q9UNH7 406 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 CAB39Q9Y376 341 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 U3KQV3 271 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 NOTCH2Q04721 2471 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 UTYO14607 1347 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 NPHP3Q7Z494 1330 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 MST1RQ04912 1400 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 NKTRP30414 1462 aaKnown RBP3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 IQSEC2Q5JU85 1478 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 DIP2AQ14689 1571 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 A0A0U1RQJ8 604 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 A0A0U1RRA0 63 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 GOLGA6L7A0A1B0GV03 622 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 ANKUB1A6NFN9 424 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 NCF1BA6NI72 391 aaPredicted RBP3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 NCF1CA8MVU1 366 aaPredicted RBP3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 KIF2AO00139 706 aaPredicted RBP3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 RHODO00212 210 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 EBAG9O00559 213 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 E2F3O00716 465 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 DNALI1O14645 258 aaPredicted RBP3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 HS3ST1O14792 307 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 XPO1O14980 1071 aaKnown RBP3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 SMAD9O15198 467 aaKnown RBP3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 XRCC3O43542 346 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 KRT6BP04259 564 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 HIST1H2ABP04908 130 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 HMBSP08397 361 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 PLA2G4BP0C869 781 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 KRT5P13647 590 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 GJA1P17302 382 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 NR1D1P20393 614 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 HIST1H2ADP20671 130 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 KRT6CP48668 564 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 ARSEP51690 589 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 PGGT1BP53609 377 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 OAZ1P54368 228 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 TROAPQ12815 778 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 DDX39BQ13838 428 aaKnown RBP3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 UGP2Q16851 508 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 CDO1Q16878 200 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 ZNF789Q5FWF6 425 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 Q5PR19 223 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 DCST1Q5T197 706 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 KLHL10Q6JEL2 608 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 CASC4Q6P4E1 433 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 TMEM26Q6ZUK4 368 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 RUFY3Q7L099 469 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 HIST3H2AQ7L7L0 130 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 RTN4RL2Q86UN3 420 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 SIAH3Q8IW03 269 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 CFAP206Q8IYR0 622 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 FAM47BQ8NA70 645 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 DRAXINQ8NBI3 349 aaPredicted RBP3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 KIAA0895Q8NCT3 520 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 OR52B4Q8NGK2 314 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 PSMA8Q8TAA3 256 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 HM13Q8TCT9 377 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 NR4A3Q92570 626 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 INPP5DQ92835 1189 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 SNAPC3Q92966 411 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 FBXO32Q969P5 355 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 ERGIC1Q969X5 290 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 ERLEC1Q96DZ1 483 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 GRAMD2BQ96HH9 432 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 MS4A10Q96PG2 267 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 TMEM204Q9BSN7 226 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 IFT27Q9BW83 186 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 SLC39A8Q9C0K1 460 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 RBM38Q9H0Z9 239 aaKnown RBP3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 NAPBQ9H115 298 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 FN3KQ9H479 309 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 ACTR8Q9H981 624 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 CALHM2Q9HA72 323 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 TRPV5Q9NQA5 729 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 PIGVQ9NUD9 493 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 SLCO1C1Q9NYB5 712 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 TRIM10Q9UDY6 481 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 UBQLN2Q9UHD9 624 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 MAD2L2Q9UI95 211 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 CLEC4AQ9UMR7 237 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 PLA2G4CQ9UP65 541 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 ZNF541Q9H0D2 1346 aa3.03□□□□□ -1.92
DEPDC1-204ENST00000489862 PTCH1Q13635 1447 aa3.03□□□□□ -1.93
DEPDC1-204ENST00000489862 FAM135BQ49AJ0 1406 aa3.03□□□□□ -1.93
DEPDC1-204ENST00000489862 NCOA3Q9Y6Q9 1424 aa3.03□□□□□ -1.93
DEPDC1-204ENST00000489862 KIAA1217Q5T5P2 1943 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 NALCNQ8IZF0 1738 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms