RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 MRPS2Q9Y399 296 aaKnown RBP18.36■□□□□ 0.53
CD55-209ENST00000488171 A0A1W2PQ72 361 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 CBX6O95503 412 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 STATHP02808 62 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 C8GP07360 202 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 RNF224P0DH78 156 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 COX6A1P12074 109 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 RGS4P49798 205 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 EMP2P54851 167 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 SP140Q13342 867 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 FAM53BQ14153 422 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 SYT16Q17RD7 645 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 BBS9Q3SYG4 887 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 KIAA0408Q6ZU52 694 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 VN1R4Q7Z5H5 301 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 MCOLN3Q8TDD5 553 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 PWWP2AQ96N64 755 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 WDR83Q9BRX9 315 aaKnown RBP18.35■□□□□ 0.53
CD55-209ENST00000488171 YIPF2Q9BWQ6 316 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 PARVBQ9HBI1 364 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 MKKSQ9NPJ1 570 aaPredicted RBP18.35■□□□□ 0.53
CD55-209ENST00000488171 C14orf105Q9NVL8 296 aa18.35■□□□□ 0.53
CD55-209ENST00000488171 COPG1Q9Y678 874 aaKnown RBP18.35■□□□□ 0.53
CD55-209ENST00000488171 KLHL18O94889 574 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 ANXA5P08758 320 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 HRH2P25021 359 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 GLRBP48167 497 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 EFNA3P52797 238 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 CSNK1G2P78368 415 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 PHKG1Q16816 387 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 HP1BP3Q5SSJ5 553 aaPredicted RBP18.34■□□□□ 0.53
CD55-209ENST00000488171 TEDDM1Q5T9Z0 273 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 AGTRAPQ6RW13 159 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 NDUFAF7Q7L592 441 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 GALNT7Q86SF2 657 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 MYO1HQ8N1T3 1032 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 GABPB2Q8TAK5 448 aaPredicted RBP18.34■□□□□ 0.53
CD55-209ENST00000488171 SSC4DQ8WTU2 575 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 LINGO1Q96FE5 620 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 CAPZA3Q96KX2 299 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 ESPL1Q14674 2120 aa18.34■□□□□ 0.53
CD55-209ENST00000488171 USP9YO00507 2555 aaPredicted RBP18.33■□□□□ 0.53
CD55-209ENST00000488171 KCNE1BA0A087WTH5 132 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 IGHV1-45A0A0A0MS14 117 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 SLC16A5O15375 505 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 TSPAN12O95859 305 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 ELK3P41970 407 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 PGGT1BP53609 377 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 RPS15AP62244 130 aaKnown RBP18.33■□□□□ 0.53
CD55-209ENST00000488171 MAT1AQ00266 395 aaKnown RBP18.33■□□□□ 0.53
CD55-209ENST00000488171 EEF1A2Q05639 463 aaKnown RBP18.33■□□□□ 0.53
CD55-209ENST00000488171 MORF4L2Q15014 288 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 NDUFA9Q16795 377 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 ZXDCQ2QGD7 858 aaPredicted RBP18.33■□□□□ 0.53
CD55-209ENST00000488171 TRMT10BQ6PF06 316 aaKnown RBP18.33■□□□□ 0.53
CD55-209ENST00000488171 ISLR2Q6UXK2 745 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 CREG2Q8IUH2 290 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 ZC3H7AQ8IWR0 971 aaKnown RBP18.33■□□□□ 0.53
CD55-209ENST00000488171 KLHL7Q8IXQ5 586 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 SHISA5Q8N114 240 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 PRR7Q8TB68 274 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 DNAJB14Q8TBM8 379 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 SGPP1Q9BX95 441 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 PCBD2Q9H0N5 130 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 ATG10Q9H0Y0 220 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 EPS8L2Q9H6S3 715 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 CHMP2BQ9UQN3 213 aa18.33■□□□□ 0.53
CD55-209ENST00000488171 PRRC2CQ9Y520 2896 aaKnown RBP18.33■□□□□ 0.52
CD55-209ENST00000488171 NSG1A0A0A6YYJ2 146 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 HEXBP07686 556 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 PRR35P0CG20 571 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 MFAP5Q13361 173 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 NAE1Q13564 534 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 FAAH2Q6GMR7 532 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 HIBCHQ6NVY1 386 aaPredicted RBP18.32■□□□□ 0.52
CD55-209ENST00000488171 LINC00696Q6ZRV3 163 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 SYDE1Q6ZW31 735 aaPredicted RBP18.32■□□□□ 0.52
CD55-209ENST00000488171 PALM2Q8IXS6 379 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 KBTBD2Q8IY47 623 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 PDIK1LQ8N165 341 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 OR9A4Q8NGU2 314 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 PSMF1Q92530 271 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 CFAP36Q96G28 342 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 LMF1Q96S06 567 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 MACROD1Q9BQ69 325 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 PPANQ9NQ55 473 aaKnown RBP18.32■□□□□ 0.52
CD55-209ENST00000488171 TEX264Q9Y6I9 313 aa18.32■□□□□ 0.52
CD55-209ENST00000488171 LOC102723996A0A087X1L8 192 aa18.31■□□□□ 0.52
CD55-209ENST00000488171 BMP10O95393 424 aa18.31■□□□□ 0.52
CD55-209ENST00000488171 FDXRP22570 491 aa18.31■□□□□ 0.52
CD55-209ENST00000488171 CXCR2P25025 360 aa18.31■□□□□ 0.52
CD55-209ENST00000488171 BCL6P41182 706 aa18.31■□□□□ 0.52
CD55-209ENST00000488171 TSFMP43897 325 aaKnown RBP18.31■□□□□ 0.52
CD55-209ENST00000488171 DR1Q01658 176 aa18.31■□□□□ 0.52
CD55-209ENST00000488171 ZNF169Q14929 603 aaPredicted RBP18.31■□□□□ 0.52
CD55-209ENST00000488171 HECTD2Q5U5R9 776 aa18.31■□□□□ 0.52
CD55-209ENST00000488171 STEAP4Q687X5 459 aa18.31■□□□□ 0.52
CD55-209ENST00000488171 TMEM214Q6NUQ4 689 aaKnown RBP18.31■□□□□ 0.52
CD55-209ENST00000488171 TMEM205Q6UW68 189 aa18.31■□□□□ 0.52
CD55-209ENST00000488171 PRSS41Q7RTY9 318 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms