RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 MUM1Q2TAK8 710 aa22.58■■□□□ 1.21
RHBDD3-205ENST00000488106 CPZQ66K79 652 aa22.58■■□□□ 1.21
RHBDD3-205ENST00000488106 MRPL14Q6P1L8 145 aaKnown RBP22.58■■□□□ 1.21
RHBDD3-205ENST00000488106 RELL1Q8IUW5 271 aa22.58■■□□□ 1.21
RHBDD3-205ENST00000488106 TMEM151BQ8IW70 566 aa22.58■■□□□ 1.21
RHBDD3-205ENST00000488106 LRRN4CLQ8ND94 238 aa22.58■■□□□ 1.21
RHBDD3-205ENST00000488106 THAP4Q8WY91 577 aa22.58■■□□□ 1.21
RHBDD3-205ENST00000488106 TSNARE1Q96NA8 513 aa22.58■■□□□ 1.21
RHBDD3-205ENST00000488106 CYTH2Q99418 400 aa22.58■■□□□ 1.21
RHBDD3-205ENST00000488106 ADNPQ9H2P0 1102 aa22.58■■□□□ 1.21
RHBDD3-205ENST00000488106 ACSS3Q9H6R3 686 aa22.58■■□□□ 1.21
RHBDD3-205ENST00000488106 GEMIN8Q9NWZ8 242 aaKnown RBP22.58■■□□□ 1.21
RHBDD3-205ENST00000488106 CTSFQ9UBX1 484 aa22.58■■□□□ 1.21
RHBDD3-205ENST00000488106 NFU1Q9UMS0 254 aa22.58■■□□□ 1.21
RHBDD3-205ENST00000488106 ARGFXA6NJG6 315 aa22.57■■□□□ 1.2
RHBDD3-205ENST00000488106 PIM1P11309 404 aaPredicted RBP22.57■■□□□ 1.2
RHBDD3-205ENST00000488106 CD1DP15813 335 aa22.57■■□□□ 1.2
RHBDD3-205ENST00000488106 PMS2P54278 862 aa22.57■■□□□ 1.2
RHBDD3-205ENST00000488106 RPS15AP62244 130 aaKnown RBP22.57■■□□□ 1.2
RHBDD3-205ENST00000488106 RELAQ04206 551 aa22.57■■□□□ 1.2
RHBDD3-205ENST00000488106 MROH9Q5TGP6 573 aa22.57■■□□□ 1.2
RHBDD3-205ENST00000488106 RAB43Q86YS6 212 aa22.57■■□□□ 1.2
RHBDD3-205ENST00000488106 EXT2Q93063 718 aa22.57■■□□□ 1.2
RHBDD3-205ENST00000488106 COL26A1Q96A83 441 aa22.57■■□□□ 1.2
RHBDD3-205ENST00000488106 FKBP10Q96AY3 582 aa22.57■■□□□ 1.2
RHBDD3-205ENST00000488106 DNAJB5O75953 348 aa22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 SLC35E2BP0CK96 405 aa22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 GRK3P35626 688 aa22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 BCL6P41182 706 aa22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 CDKL1Q00532 357 aa22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 MEF2AQ02078 507 aaPredicted RBP22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 NFATC3Q12968 1075 aa22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 ATP1A4Q13733 1029 aa22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 OR4D1Q15615 310 aa22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 C18orf21Q32NC0 220 aaPredicted RBP22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 THOC6Q86W42 341 aaKnown RBP22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 OR2Y1Q8NGV0 311 aa22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 NEIL2Q969S2 332 aa22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 PTERQ96BW5 349 aa22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 TRIM55Q9BYV6 548 aa22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 ZNF304Q9HCX3 659 aa22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 DYRK1BQ9Y463 629 aa22.56■■□□□ 1.2
RHBDD3-205ENST00000488106 RFPL1O75677 317 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 CD63P08962 238 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 SFTPCP11686 197 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 FBLP22087 321 aaKnown RBP22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 CCR8P51685 355 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 ATP6V0D1P61421 351 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 C19orf57Q0VDD7 668 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 TGFBIQ15582 683 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 CATSPEREQ5SY80 951 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 SHISA6Q6ZSJ9 500 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 OVCH1Q7RTY7 1134 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 VN1R4Q7Z5H5 301 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 TBC1D1Q86TI0 1168 aaPredicted RBP22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 GPSM1Q86YR5 675 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 IFT20Q8IY31 132 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 UHMK1Q8TAS1 419 aaKnown RBP22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 SLC5A11Q8WWX8 675 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 MACROD1Q9BQ69 325 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 TLK1Q9UKI8 766 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 SLC22A14Q9Y267 594 aa22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 GCN1Q92616 2671 aaKnown RBP22.55■■□□□ 1.2
RHBDD3-205ENST00000488106 TXNDC9O14530 226 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 WDR47O94967 919 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 HNMTP50135 292 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 EMP3P54852 163 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 NKG7Q16617 165 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 PRMT9Q6P2P2 845 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 MRGPREQ86SM8 312 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 TMPRSS11BQ86T26 416 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 ABHD11Q8NFV4 315 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 C9orf43Q8TAL5 461 aaPredicted RBP22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 RHBDF1Q96CC6 855 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 UBXN10Q96LJ8 280 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 DRC3Q9H069 523 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 SOX17Q9H6I2 414 aaPredicted RBP22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 ZNF71Q9NQZ8 489 aaPredicted RBP22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 WWOXQ9NZC7 414 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 TUBD1Q9UJT1 453 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 RNF112Q9ULX5 631 aa22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 MRPS2Q9Y399 296 aaKnown RBP22.54■■□□□ 1.2
RHBDD3-205ENST00000488106 FFAR3O14843 346 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 GPR42O15529 346 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 LCMT2O60294 686 aaKnown RBP22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 ONECUT2O95948 504 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 UMODP07911 640 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 CRABP2P29373 138 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 GDF5P43026 501 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 DLG1Q12959 904 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 FBXO48Q5FWF7 155 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 GARNL3Q5VVW2 1013 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 APLFQ8IW19 511 aaPredicted RBP22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 PRSS58Q8IYP2 241 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 ABHD17AQ96GS6 310 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 SPSB2Q99619 263 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 YIPF2Q9BWQ6 316 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 ING2Q9H160 280 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 SLC25A18Q9H1K4 315 aa22.53■■□□□ 1.2
RHBDD3-205ENST00000488106 SPNS1Q9H2V7 528 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms