RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 ACOX1Q15067 660 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 XKR6Q5GH73 641 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 OR4F3Q6IEY1 312 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 OR2T5Q6IEZ7 315 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 XKR5Q6UX68 686 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 ANKRD13BQ86YJ7 626 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 ZZZ3Q8IYH5 903 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 RASGEF1AQ8N9B8 481 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 OR2T29Q8NH02 315 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 TRUB1Q8WWH5 349 aaKnown RBP25.25■■□□□ 1.63
HLA-C-208ENST00000487245 PLEKHA8Q96JA3 519 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 EPHX3Q9H6B9 360 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 FAM120CQ9NX05 1096 aaKnown RBP25.25■■□□□ 1.63
HLA-C-208ENST00000487245 VPS29Q9UBQ0 182 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 ENPP5Q9UJA9 477 aa25.25■■□□□ 1.63
HLA-C-208ENST00000487245 SLC5A10A0PJK1 596 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 SCN2BO60939 215 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 CISD3P0C7P0 127 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 AGXTP21549 392 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 IGFBP5P24593 272 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 CXCR4P61073 352 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 DHCR24Q15392 516 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 VMACQ2NL98 169 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 GRHL2Q6ISB3 625 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 AGTRAPQ6RW13 159 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 OR8J2Q8NGG1 315 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 WDR20Q8TBZ3 569 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 AP2M1Q96CW1 435 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 ZSWIM3Q96MP5 696 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 AP1M2Q9Y6Q5 423 aa25.24■■□□□ 1.63
HLA-C-208ENST00000487245 H0YIV9 168 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 TSPAN6O43657 245 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 FOXD2O60548 495 aaPredicted RBP25.23■■□□□ 1.63
HLA-C-208ENST00000487245 DPM1O60762 260 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 CLPXO76031 633 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 MYO1DO94832 1006 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 JUNDP17535 347 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 WNT3P56703 355 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 NTHL1P78549 312 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 TMEM115Q12893 351 aaPredicted RBP25.23■■□□□ 1.63
HLA-C-208ENST00000487245 SPIDRQ14159 915 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 SLC44A4Q53GD3 710 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 CAPN13Q6MZZ7 669 aaPredicted RBP25.23■■□□□ 1.63
HLA-C-208ENST00000487245 SLC16A12Q6ZSM3 486 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 SYT12Q8IV01 421 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 SPATA9Q9BWV2 254 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 RAD21L1Q9H4I0 556 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 BRF2Q9HAW0 419 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 SPATA6Q9NWH7 488 aaPredicted RBP25.23■■□□□ 1.63
HLA-C-208ENST00000487245 STOX2Q9P2F5 926 aaPredicted RBP25.23■■□□□ 1.63
HLA-C-208ENST00000487245 BAG5Q9UL15 447 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 B3GNT3Q9Y2A9 372 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 CLIC1O00299 241 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 CBFA2T3O75081 653 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 CCR3P51677 355 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 BMXP51813 675 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 SLC14A1Q13336 389 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 UGT8Q16880 541 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 ZNF648Q5T619 568 aaPredicted RBP25.23■■□□□ 1.63
HLA-C-208ENST00000487245 KDM4DQ6B0I6 523 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 ZNF554Q86TJ5 538 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 CYP4Z1Q86W10 505 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 EGLN2Q96KS0 407 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 FUNDC2Q9BWH2 189 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 REXO4Q9GZR2 422 aaKnown RBP25.23■■□□□ 1.63
HLA-C-208ENST00000487245 PAK1IP1Q9NWT1 392 aaPredicted RBP25.23■■□□□ 1.63
HLA-C-208ENST00000487245 RWDD3Q9Y3V2 267 aa25.23■■□□□ 1.63
HLA-C-208ENST00000487245 FPGTO14772 594 aa25.22■■□□□ 1.63
HLA-C-208ENST00000487245 MRPS14O60783 128 aaKnown RBP25.22■■□□□ 1.63
HLA-C-208ENST00000487245 KCNK5O95279 499 aa25.22■■□□□ 1.63
HLA-C-208ENST00000487245 B3GALT4O96024 378 aa25.22■■□□□ 1.63
HLA-C-208ENST00000487245 FPR1P21462 350 aa25.22■■□□□ 1.63
HLA-C-208ENST00000487245 DNAJA1P31689 397 aaKnown RBP25.22■■□□□ 1.63
HLA-C-208ENST00000487245 ARHGDIAP52565 204 aa25.22■■□□□ 1.63
HLA-C-208ENST00000487245 PNLIPRP1P54315 467 aa25.22■■□□□ 1.63
HLA-C-208ENST00000487245 PPP1R8Q12972 351 aaKnown RBP25.22■■□□□ 1.63
HLA-C-208ENST00000487245 NAE1Q13564 534 aa25.22■■□□□ 1.63
HLA-C-208ENST00000487245 DOC2AQ14183 400 aa25.22■■□□□ 1.63
HLA-C-208ENST00000487245 ANKDD1AQ495B1 522 aa25.22■■□□□ 1.63
HLA-C-208ENST00000487245 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.22■■□□□ 1.63
HLA-C-208ENST00000487245 LINC00299Q6ZSB3 139 aa25.22■■□□□ 1.63
HLA-C-208ENST00000487245 GRASPQ7Z6J2 395 aaPredicted RBP25.22■■□□□ 1.63
HLA-C-208ENST00000487245 SLC22A15Q8IZD6 547 aa25.22■■□□□ 1.63
HLA-C-208ENST00000487245 CELF5Q8N6W0 485 aaKnown RBP25.22■■□□□ 1.63
HLA-C-208ENST00000487245 OR56A3Q8NH54 315 aa25.22■■□□□ 1.63
HLA-C-208ENST00000487245 ABTB1Q969K4 478 aaPredicted RBP25.22■■□□□ 1.63
HLA-C-208ENST00000487245 NOTCH4Q99466 2003 aa25.22■■□□□ 1.63
HLA-C-208ENST00000487245 ZNF99A8MXY4 864 aaPredicted RBP25.21■■□□□ 1.63
HLA-C-208ENST00000487245 EPN2O95208 641 aa25.21■■□□□ 1.63
HLA-C-208ENST00000487245 LRATO95237 230 aa25.21■■□□□ 1.63
HLA-C-208ENST00000487245 POU2F2P09086 479 aa25.21■■□□□ 1.63
HLA-C-208ENST00000487245 ADH5P11766 374 aa25.21■■□□□ 1.63
HLA-C-208ENST00000487245 CTSCP53634 463 aa25.21■■□□□ 1.63
HLA-C-208ENST00000487245 PIWIL3Q7Z3Z3 882 aaKnown RBP25.21■■□□□ 1.63
HLA-C-208ENST00000487245 DNAAF2Q9NVR5 837 aaKnown RBP25.21■■□□□ 1.63
HLA-C-208ENST00000487245 SLC27A6Q9Y2P4 619 aa25.21■■□□□ 1.63
HLA-C-208ENST00000487245 TMEM202A6NGA9 273 aa25.21■■□□□ 1.63
HLA-C-208ENST00000487245 MAGEB3O15480 346 aa25.21■■□□□ 1.63
HLA-C-208ENST00000487245 HOXC11O43248 304 aaPredicted RBP25.21■■□□□ 1.63
HLA-C-208ENST00000487245 PRNPP04156 253 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms