RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 MARVELD2Q8N4S9 558 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 TAPBPLQ9BX59 468 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 NANOGQ9H9S0 305 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 MEAF6Q9HAF1 191 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 MOCS1Q9NZB8 636 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 MKLN1Q9UL63 735 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 CNTN5O94779 1100 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 CLIC3O95833 236 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 ATF6P18850 670 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 LEPRP48357 1165 aaKnown RBP15.98■□□□□ 0.15
COL7A1-210ENST00000487017 SIX1Q15475 284 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-210ENST00000487017 CCL14Q16627 93 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 ZNF630Q2M218 657 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-210ENST00000487017 PTCHD3Q3KNS1 767 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 FAM43BQ6ZT52 329 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-210ENST00000487017 ZSWIM3Q96MP5 696 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 ADAP2Q9NPF8 381 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 TNFRSF10DQ9UBN6 386 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 LINGO3P0C6S8 592 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 CREB5Q02930 508 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 SLC13A2Q13183 592 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 SP140Q13342 867 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 GFOD2Q3B7J2 385 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 TECRLQ5HYJ1 363 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 THOC7Q6I9Y2 204 aaKnown RBP15.98■□□□□ 0.15
COL7A1-210ENST00000487017 ZNF517Q6ZMY9 492 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-210ENST00000487017 CLDN19Q8N6F1 224 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 OR5T3Q8NGG3 340 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 CHIAQ9BZP6 476 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 CHMP1AQ9HD42 196 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-210ENST00000487017 IFT46Q9NQC8 304 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 Q9Y3F1 56 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 AGR2O95994 175 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 RB1P06400 928 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 ZNF3P17036 446 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 GLDCP23378 1020 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 XKR4Q5GH76 650 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 OTOP2Q7RTS6 562 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 SLAIN1Q8ND83 568 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 OR6K6Q8NGW6 343 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 CD99L2Q8TCZ2 262 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 SLC7A6OSQ96CW6 309 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-210ENST00000487017 RIPOR3Q96MK2 946 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 A0A1W2PRU2 124 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 EPOP01588 193 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 ACADVLP49748 655 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 C1orf220Q5T0J3 134 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 PRPF38BQ5VTL8 546 aaKnown RBP15.98■□□□□ 0.15
COL7A1-210ENST00000487017 GDF6Q6KF10 455 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-210ENST00000487017 NKD1Q969G9 470 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 GAL3ST4Q96RP7 486 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 ZNF382Q96SR6 550 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 TRMT61BQ9BVS5 477 aaKnown RBP15.98■□□□□ 0.15
COL7A1-210ENST00000487017 PLEKHA1Q9HB21 404 aa15.98■□□□□ 0.15
COL7A1-210ENST00000487017 PLOD2O00469 737 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 ENTPD6O75354 484 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 YES1P07947 543 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 IL12BP29460 328 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 TMBIM6P55061 237 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 DIO3P55073 304 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 LRRC32Q14392 662 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 MYLK3Q32MK0 819 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 TPRG1Q6ZUI0 275 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 ALPK1Q96QP1 1244 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 OR6C70A6NIJ9 312 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 ELK4P28324 431 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 ARPC4P59998 168 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 PTPRCAPQ14761 206 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 CEACAM20Q6UY09 585 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 OR8J3Q8NGG0 315 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 LRRC20Q8TCA0 184 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 SLC45A3Q96JT2 553 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 ZDHHC4Q9NPG8 344 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 CCM2LQ9NUG4 571 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-210ENST00000487017 ARFGEF2Q9Y6D5 1785 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 PRSS51A0A1B0GVH4 220 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 RASAL1O95294 804 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 PEPDP12955 493 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 ZNF30P17039 623 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 AGTR2P50052 363 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 ADAM8P78325 824 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 C6orf136Q5SQH8 315 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 QSOX2Q6ZRP7 698 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 ASB18Q6ZVZ8 466 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 CYS1Q717R9 158 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 CENPSQ8N2Z9 138 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 POF1BQ8WVV4 589 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 ARMC5Q96C12 935 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 SLC31A1O15431 190 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 UBXN7O94888 489 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 FUT4P22083 530 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 CYBRD1Q53TN4 286 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 SLC8B1Q6J4K2 584 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 ADGRD2Q7Z7M1 963 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 PRSS58Q8IYP2 241 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 METTL21AQ8WXB1 218 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 RENP00797 406 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 CD1DP15813 335 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 ZNF823P16415 610 aa15.97■□□□□ 0.15
COL7A1-210ENST00000487017 MAZP56270 477 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms