RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 FYNP06241 537 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 ZFYP08048 801 aaPredicted RBP5.5□□□□□ -1.53
RTN4-214ENST00000486085 IGHV4-38-2P0DP08 117 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 JAK1P23458 1154 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 RPS12P25398 132 aaKnown RBP5.5□□□□□ -1.53
RTN4-214ENST00000486085 NT5C2P49902 561 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 TIMM10P62072 90 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 LGALS3BPQ08380 585 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 SYT14P1Q58G82 188 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 DCAF10Q5QP82 559 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 SFMBT2Q5VUG0 894 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 PLA2G4FQ68DD2 849 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 RBMS3Q6XE24 437 aaKnown RBP5.5□□□□□ -1.53
RTN4-214ENST00000486085 MEX3BQ6ZN04 569 aaKnown RBP5.5□□□□□ -1.53
RTN4-214ENST00000486085 CCDC186Q7Z3E2 898 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 ARHGAP22Q7Z5H3 698 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 TMEM139Q8IV31 216 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 NPEPL1Q8NDH3 523 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 GRHL3Q8TE85 626 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 CCDC107Q8WV48 283 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 DHX58Q96C10 678 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 NSL1Q96IY1 281 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 ZNF558Q96NG5 402 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 CD209Q9NNX6 404 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 IL1RAPL2Q9NP60 686 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 HMG20BQ9P0W2 317 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 RPAP1Q9BWH6 1393 aaPredicted RBP5.5□□□□□ -1.53
RTN4-214ENST00000486085 MYH13Q9UKX3 1938 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 SMCHD1A6NHR9 2005 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 COL4A5P29400 1685 aa5.5□□□□□ -1.53
RTN4-214ENST00000486085 GAKO14976 1311 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 ZMYM6O95789 1325 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 SCN9AQ15858 1988 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 MYH7P12883 1935 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 CHD4Q14839 1912 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 HSPA8P11142 646 aaKnown RBP5.49□□□□□ -1.53
RTN4-214ENST00000486085 LIFP15018 202 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 CYP11B2P19099 503 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 CCR10P46092 362 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 POLR2LP62875 67 aaKnown RBP5.49□□□□□ -1.53
RTN4-214ENST00000486085 ZC2HC1CQ53FD0 456 aaPredicted RBP5.49□□□□□ -1.53
RTN4-214ENST00000486085 ELFN2Q5R3F8 820 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 SLC35E4Q6ICL7 350 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 PRR27Q6MZM9 219 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 ZSCAN25Q6NSZ9 544 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 NUP54Q7Z3B4 507 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 TRPT1Q86TN4 253 aaKnown RBP5.49□□□□□ -1.53
RTN4-214ENST00000486085 MFN1Q8IWA4 741 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 CAMKVQ8NCB2 501 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 DNASE2BQ8WZ79 361 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 TMEM143Q96AN5 459 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 THOC1Q96FV9 657 aaKnown RBP5.49□□□□□ -1.53
RTN4-214ENST00000486085 ZNF701Q9NV72 531 aaPredicted RBP5.49□□□□□ -1.53
RTN4-214ENST00000486085 DAPK2Q9UIK4 370 aa5.49□□□□□ -1.53
RTN4-214ENST00000486085 COL2A1P02458 1487 aaPredicted RBP5.49□□□□□ -1.53
RTN4-214ENST00000486085 SMIM1B2RUZ4 78 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 DNM1LO00429 736 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 PTGESO14684 152 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 CLIC2O15247 247 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 RNASEH1O60930 286 aaKnown RBP5.48□□□□□ -1.53
RTN4-214ENST00000486085 PIGNO95427 931 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 IGHV2-70P01814 119 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 ATP5BP06576 529 aaKnown RBP5.48□□□□□ -1.53
RTN4-214ENST00000486085 ADORA1P30542 326 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 TIMP3P35625 211 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 ZNF41P51814 821 aaPredicted RBP5.48□□□□□ -1.53
RTN4-214ENST00000486085 MAT1AQ00266 395 aaKnown RBP5.48□□□□□ -1.53
RTN4-214ENST00000486085 PRKCZQ05513 592 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 FKBP1CQ5VVH2 108 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 C11orf63Q6NUN7 778 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 CEACAM20Q6UY09 585 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 SLFN11Q7Z7L1 901 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 ROBO4Q8WZ75 1007 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 OTUB1Q96FW1 271 aaPredicted RBP5.48□□□□□ -1.53
RTN4-214ENST00000486085 FER1L6-AS2Q96M78 137 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 FEVQ99581 238 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 CPNE1Q99829 537 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 ZCCHC17Q9NP64 241 aaKnown RBP5.48□□□□□ -1.53
RTN4-214ENST00000486085 ZDHHC2Q9UIJ5 367 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 RIPK3Q9Y572 518 aa5.48□□□□□ -1.53
RTN4-214ENST00000486085 CCDC88AQ3V6T2 1871 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 WDR81Q562E7 1941 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 PRR23D1E9PI22 279 aaPredicted RBP5.47□□□□□ -1.53
RTN4-214ENST00000486085 SLC22A2O15244 555 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 PPIP5K2O43314 1243 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 ECE2O60344 883 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 PRKRAO75569 313 aaKnown RBP5.47□□□□□ -1.53
RTN4-214ENST00000486085 ACSL3O95573 720 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 PRR23D2P0DMB1 279 aaPredicted RBP5.47□□□□□ -1.53
RTN4-214ENST00000486085 EEF1B2P24534 225 aaKnown RBP5.47□□□□□ -1.53
RTN4-214ENST00000486085 MNDAP41218 407 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 GYG1P46976 350 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 ASCL1P50553 236 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 PRELPP51888 382 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 LIMK1P53667 647 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 B3GALT5-AS1P59052 145 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 ZNF415Q09FC8 603 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 PSMD6Q15008 389 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 ITPRIPL2Q3MIP1 535 aa5.47□□□□□ -1.53
RTN4-214ENST00000486085 CDK20Q8IZL9 346 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms