RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 REEP5Q00765 189 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 GRM7Q14831 915 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 SLC9A5Q14940 896 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 SETDB1Q15047 1291 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 HKDC1Q2TB90 917 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 FAM199XQ6PEV8 388 aaPredicted RBP11.32□□□□□ -0.6
HPS4-214ENST00000485842 C19orf48Q6RUI8 117 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 NXPE4Q6UWF7 544 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 TTLL10Q6ZVT0 673 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 LRRC70Q7Z2Q7 622 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 CNPY4Q8N129 248 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 RIBC1Q8N443 379 aaPredicted RBP11.32□□□□□ -0.6
HPS4-214ENST00000485842 PTGR2Q8N8N7 351 aaPredicted RBP11.32□□□□□ -0.6
HPS4-214ENST00000485842 ABHD11Q8NFV4 315 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 CT55Q8WUE5 264 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 UBTD2Q8WUN7 234 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 PHF21BQ96EK2 531 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 ZNF285Q96NJ3 590 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 OR2A5Q96R48 311 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 CCNL2Q96S94 520 aaPredicted RBP11.32□□□□□ -0.6
HPS4-214ENST00000485842 MRPL57Q9BQC6 102 aaKnown RBP11.32□□□□□ -0.6
HPS4-214ENST00000485842 MRPL46Q9H2W6 279 aaKnown RBP11.32□□□□□ -0.6
HPS4-214ENST00000485842 AKIRIN1Q9H9L7 192 aaPredicted RBP11.32□□□□□ -0.6
HPS4-214ENST00000485842 PELI2Q9HAT8 420 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 LHX9Q9NQ69 397 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 CUTCQ9NTM9 273 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 TMEM216Q9P0N5 145 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 CROTQ9UKG9 612 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 PADI1Q9ULC6 663 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 ANGPTL3Q9Y5C1 460 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 USP24Q9UPU5 2620 aa11.32□□□□□ -0.6
HPS4-214ENST00000485842 FER1L5A0AVI2 2057 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 TRBC2A0A5B9 178 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 LRRC14BA6NHZ5 514 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 MEN1O00255 615 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 OR1F1O43749 312 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 SERPIND1P05546 499 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 LIFP15018 202 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 GNAZP19086 355 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 ALAS2P22557 587 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 RORAP35398 523 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 DLSTP36957 453 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 ARSFP54793 590 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 ABHD18Q0P651 414 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 SLBPQ14493 270 aaKnown RBP eCLIP11.31□□□□□ -0.6
HPS4-214ENST00000485842 RASA2Q15283 850 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 KRT71Q3SY84 523 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 LCN10Q6JVE6 187 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 RHBDD2Q6NTF9 364 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 C16orf46Q6P387 395 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 CCDC81Q6ZN84 652 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 VN1R4Q7Z5H5 301 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 DSELQ8IZU8 1212 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 C4orf33Q8N1A6 199 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 DTWD1Q8N5C7 304 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 TBC1D19Q8N5T2 526 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 METTL27Q8N6F8 245 aaPredicted RBP11.31□□□□□ -0.6
HPS4-214ENST00000485842 TEX9Q8N6V9 391 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 ZNF740Q8NDX6 193 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 ZCCHC10Q8TBK6 192 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 ZBTB9Q96C00 473 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 MACROD1Q9BQ69 325 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 AIF1LQ9BQI0 150 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 NLNQ9BYT8 704 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 CHST8Q9H2A9 424 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 CPNE5Q9HCH3 593 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 PRM3Q9NNZ6 103 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 RUVBL1Q9Y265 456 aaKnown RBP11.31□□□□□ -0.6
HPS4-214ENST00000485842 PCDHGA4Q9Y5G9 962 aa11.31□□□□□ -0.6
HPS4-214ENST00000485842 A0A1B0GX78 115 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 HYKKA2RU49 373 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 FITM1A5D6W6 292 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 CCDC151A5D8V7 595 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 K7EPI3 171 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 COPEO14579 308 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 DSCR3O14972 297 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 KLK8O60259 260 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 LCMT2O60294 686 aaKnown RBP11.3□□□□□ -0.6
HPS4-214ENST00000485842 GLRA3O75311 464 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 KATNA1O75449 491 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 SIX3O95343 332 aaPredicted RBP11.3□□□□□ -0.6
HPS4-214ENST00000485842 GSTA1P08263 222 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 C1GALT1C1LP0DN25 315 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 EPB42P16452 691 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 TCN2P20062 427 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 AGXTP21549 392 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 EEF1DP29692 281 aaKnown RBP11.3□□□□□ -0.6
HPS4-214ENST00000485842 UCNP55089 124 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 TMPRSS3P57727 454 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 CXADRP78310 365 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 CYP4F2P78329 520 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 RELAQ04206 551 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 ZNF844Q08AG5 666 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 DNASE1L3Q13609 305 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 RBBP5Q15291 538 aaKnown RBP11.3□□□□□ -0.6
HPS4-214ENST00000485842 MUM1Q2TAK8 710 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 PRTGQ2VWP7 1150 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 FAM214AQ32MH5 1076 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 XKR6Q5GH73 641 aa11.3□□□□□ -0.6
HPS4-214ENST00000485842 YOD1Q5VVQ6 348 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms