RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 FAAH2Q6GMR7 532 aa16.28■□□□□ 0.2
SMC4-216ENST00000485645 RPUSD3Q6P087 351 aaKnown RBP16.28■□□□□ 0.2
SMC4-216ENST00000485645 FAM180AQ6UWF9 173 aa16.28■□□□□ 0.2
SMC4-216ENST00000485645 PLD3Q8IV08 490 aa16.28■□□□□ 0.2
SMC4-216ENST00000485645 SPNS2Q8IVW8 549 aa16.28■□□□□ 0.2
SMC4-216ENST00000485645 LRRC56Q8IYG6 542 aaPredicted RBP16.28■□□□□ 0.2
SMC4-216ENST00000485645 CPNE9Q8IYJ1 553 aa16.28■□□□□ 0.2
SMC4-216ENST00000485645 ARHGEF39Q8N4T4 335 aa16.28■□□□□ 0.2
SMC4-216ENST00000485645 OR1N1Q8NGS0 311 aa16.28■□□□□ 0.2
SMC4-216ENST00000485645 CD200R1Q8TD46 325 aa16.28■□□□□ 0.2
SMC4-216ENST00000485645 BRIX1Q8TDN6 353 aaKnown RBP16.28■□□□□ 0.2
SMC4-216ENST00000485645 SIGLEC10Q96LC7 697 aa16.28■□□□□ 0.2
SMC4-216ENST00000485645 PRAP1Q96NZ9 151 aa16.28■□□□□ 0.2
SMC4-216ENST00000485645 RIC8BQ9NVN3 520 aa16.28■□□□□ 0.2
SMC4-216ENST00000485645 PTGFRNQ9P2B2 879 aa16.28■□□□□ 0.2
SMC4-216ENST00000485645 FBXO5Q9UKT4 447 aa16.28■□□□□ 0.2
SMC4-216ENST00000485645 ZGRF1Q86YA3 2104 aa16.28■□□□□ 0.2
SMC4-216ENST00000485645 EIF3FO00303 357 aaPredicted RBP16.27■□□□□ 0.2
SMC4-216ENST00000485645 P2RX6O15547 441 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 WFS1O76024 890 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 UQCRHP07919 91 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 EDN3P14138 238 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 HRH2P25021 359 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 AVPR1BP47901 424 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 MPP1Q00013 466 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 SYT16Q17RD7 645 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 HSP90AA5PQ58FG0 334 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 UGT3A1Q6NUS8 523 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 PIWIL4Q7Z3Z4 852 aaKnown RBP16.27■□□□□ 0.2
SMC4-216ENST00000485645 AGGF1Q8N302 714 aaeCLIP16.27■□□□□ 0.2
SMC4-216ENST00000485645 NAT8LQ8N9F0 302 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.27■□□□□ 0.2
SMC4-216ENST00000485645 GRK7Q8WTQ7 553 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 PSMF1Q92530 271 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 FAM167BQ9BTA0 163 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 AARSD1Q9BTE6 412 aaKnown RBP16.27■□□□□ 0.2
SMC4-216ENST00000485645 CCDC177Q9NQR7 707 aaPredicted RBP16.27■□□□□ 0.2
SMC4-216ENST00000485645 TMEM184CQ9NVA4 438 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 MKL2Q9ULH7 1088 aa16.27■□□□□ 0.2
SMC4-216ENST00000485645 DIDO1Q9BTC0 2240 aaKnown RBP16.27■□□□□ 0.19
SMC4-216ENST00000485645 CACNA1DQ01668 2161 aa16.27■□□□□ 0.19
SMC4-216ENST00000485645 H0YIG0 161 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 PGRMC1O00264 195 aaKnown RBP16.26■□□□□ 0.19
SMC4-216ENST00000485645 E2F3O00716 465 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 BMP10O95393 424 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 ICAM2P13598 275 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 COL8A1P27658 744 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 SOX11P35716 441 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 AP2B1P63010 937 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 MAT1AQ00266 395 aaKnown RBP16.26■□□□□ 0.19
SMC4-216ENST00000485645 PTK6Q13882 451 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 LRRC8EQ6NSJ5 796 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 RIPOR1Q6ZS17 1223 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 ZC3H7AQ8IWR0 971 aaKnown RBP16.26■□□□□ 0.19
SMC4-216ENST00000485645 PPIL6Q8IXY8 311 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 SIRT6Q8N6T7 355 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 BCORP1Q8N888 145 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 MCOLN3Q8TDD5 553 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 HAS2Q92819 552 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 IARS2Q9NSE4 1012 aaKnown RBP16.26■□□□□ 0.19
SMC4-216ENST00000485645 PLA2G3Q9NZ20 509 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 TRMT6Q9UJA5 497 aaKnown RBP16.26■□□□□ 0.19
SMC4-216ENST00000485645 OSGIN2Q9Y236 505 aa16.26■□□□□ 0.19
SMC4-216ENST00000485645 LOC102723996A0A087X1L8 192 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 TRAV17A0A0B4J275 112 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 LRRTM2O43300 516 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 RGS4P49798 205 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 RPS15AP62244 130 aaKnown RBP16.25■□□□□ 0.19
SMC4-216ENST00000485645 TBPL1P62380 186 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 PCOLCEQ15113 449 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 ZNF787Q6DD87 383 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 TMEM205Q6UW68 189 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 LURAP1LQ8IV03 231 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 PALM2Q8IXS6 379 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 GABPB2Q8TAK5 448 aaPredicted RBP16.25■□□□□ 0.19
SMC4-216ENST00000485645 METTL21AQ8WXB1 218 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 ANP32BQ92688 251 aaKnown RBP16.25■□□□□ 0.19
SMC4-216ENST00000485645 MAGEB10Q96LZ2 347 aaPredicted RBP16.25■□□□□ 0.19
SMC4-216ENST00000485645 CCDC138Q96M89 665 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 ZNF700Q9H0M5 742 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 PCBD2Q9H0N5 130 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 OLAHQ9NV23 265 aa16.25■□□□□ 0.19
SMC4-216ENST00000485645 MRPS2Q9Y399 296 aaKnown RBP16.25■□□□□ 0.19
SMC4-216ENST00000485645 KCNE1BA0A087WTH5 132 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 GOLGA6L10A0A0M3HER8 536 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 NSA2O95478 260 aaKnown RBP16.24■□□□□ 0.19
SMC4-216ENST00000485645 STATHP02808 62 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 C8GP07360 202 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 CELA2AP08217 269 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 C8orf89P0DMQ9 161 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 ITGAMP11215 1152 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 PGAM1P18669 254 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 FNTAP49354 379 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 TNFSF10P50591 281 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 PER3P56645 1201 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 VN1R4Q7Z5H5 301 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 C2CD4AQ8NCU7 369 aaPredicted RBP16.24■□□□□ 0.19
SMC4-216ENST00000485645 OR9A4Q8NGU2 314 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 ACTRT1Q8TDG2 376 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 EEF1AKMT1Q8WVE0 214 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms