RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	LHPP	Q9H008	270 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZNF282	Q9UDV7	671 aa	Predicted RBP	10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	RUVBL1	Q9Y265	456 aa	Known RBP	10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	PPP2R2C	Q9Y2T4	447 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	KLK4	Q9Y5K2	254 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	KLF2	Q9Y5W3	355 aa	Predicted RBP	10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	MAD1L1	Q9Y6D9	718 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	ANKHD1	Q8IWZ3	2542 aa	Known RBP	10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZCWPW2	A0A1B0GU75	182 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	FAM237B	A0A1B0GVD1	139 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	MAGEB16	A2A368	324 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	MYO1C	O00159	1063 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	MAP2K7	O14733	419 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	KIF5C	O60282	957 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	VPS26A	O75436	327 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	JRK	O75564	520 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	SLC16A8	O95907	504 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	ERG	P11308	486 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	ACPP	P15309	386 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	ATP5D	P30049	168 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	COIL	P38432	576 aa	Predicted RBP	10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	MAGEA6	P43360	314 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	TSFM	P43897	325 aa	Known RBP	10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	CARS	P49589	748 aa	Known RBP	10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	EMP2	P54851	167 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	ADAR	P55265	1226 aa	Known RBP	10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	PRDX1	Q06830	199 aa	Known RBP	10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZNF169	Q14929	603 aa	Predicted RBP	10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	SYT16	Q17RD7	645 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	PRTG	Q2VWP7	1150 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	THEMIS2	Q5TEJ8	643 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	ICE2	Q659A1	982 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	PRMT9	Q6P2P2	845 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZNF549	Q6P9A3	640 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	CYHR1	Q6ZMK1	362 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	MRGPRG	Q86SM5	289 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	PAQR7	Q86WK9	346 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZNF295-AS1	Q8N0V1	137 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	CSNK1A1L	Q8N752	337 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZNF480	Q8WV37	535 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	RELT	Q969Z4	430 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	MMAB	Q96EY8	250 aa	Predicted RBP	10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	SERPINB12	Q96P63	405 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	GPR21	Q99679	349 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	SLX1A	Q9BQ83	275 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	CCDC68	Q9H2F9	335 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	EPS8L2	Q9H6S3	715 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	ENAM	Q9NRM1	1142 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	FAM114A2	Q9NRY5	505 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	C20orf96	Q9NUD7	363 aa	Predicted RBP	10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	INTS10	Q9NVR2	710 aa	Known RBP	10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	PLA2G3	Q9NZ20	509 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	TRPC4	Q9UBN4	977 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	PCYOX1	Q9UHG3	505 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	MED16	Q9Y2X0	877 aa		10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	INTS1	Q8N201	2190 aa	Known RBP	10.05	□□□□□ -0.8
HMGN1-215	ENST00000485550	CPAMD8	Q8IZJ3	1885 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550		A0A0A6YYC8	382 aa	Predicted RBP	10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	NSG1	A0A0A6YYJ2	146 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550		E7ENX8	843 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550		H7BY64	318 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550		I3L1I5	382 aa	Predicted RBP	10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZBTB14	O43829	449 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	HAUS5	O94927	633 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	HP	P00738	406 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	F10	P00742	488 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	HEXB	P07686	556 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	CXCR2	P25025	360 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	HSD17B2	P37059	387 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	SLC1A2	P43004	574 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	SNRPN	P63162	240 aa	Known RBP	10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	MPP1	Q00013	466 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	MAT1A	Q00266	395 aa	Known RBP	10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	TAP2	Q03519	686 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	EEF1A2	Q05639	463 aa	Known RBP	10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	ARHGAP19	Q14CB8	494 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZNF630	Q2M218	657 aa	Predicted RBP	10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	TTLL9	Q3SXZ7	439 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	HSP90AA5P	Q58FG0	334 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	ATG9B	Q674R7	924 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	CCDC137	Q6PK04	289 aa	Known RBP	10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	FAM180A	Q6UWF9	173 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	IGFL2	Q6UWQ7	119 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	ISLR2	Q6UXK2	745 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	SPNS3	Q6ZMD2	512 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	BNC2	Q6ZN30	1099 aa	Predicted RBP	10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	PIWIL4	Q7Z3Z4	852 aa	Known RBP	10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	CPNE9	Q8IYJ1	553 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	SHISA5	Q8N114	240 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	AGGF1	Q8N302	714 aa	eCLIP	10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	RASGEF1C	Q8N431	466 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	MCU	Q8NE86	351 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	ASB11	Q8WXH4	323 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	RERG	Q96A58	199 aa	Predicted RBP	10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	CCDC120	Q96HB5	630 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	VPS50	Q96JG6	964 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	PRAP1	Q96NZ9	151 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	OR2A5	Q96R48	311 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	MACROD1	Q9BQ69	325 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms