RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 FAM129CQ86XR2 697 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 MCATQ8IVS2 390 aaKnown RBP11.72□□□□□ -0.53
TRA2B-213ENST00000485530 TCAIMQ8N3R3 496 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 ARMC2Q8NEN0 867 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 OR1L3Q8NH93 324 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 WDR36Q8NI36 951 aaKnown RBP11.72□□□□□ -0.53
TRA2B-213ENST00000485530 ZNF501Q96CX3 271 aaPredicted RBP11.72□□□□□ -0.53
TRA2B-213ENST00000485530 ZNF578Q96N58 590 aaPredicted RBP11.72□□□□□ -0.53
TRA2B-213ENST00000485530 SLC46A1Q96NT5 459 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 OR6C1Q96RD1 312 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 SMC6Q96SB8 1091 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 SPRY4Q9C004 299 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 STRADBQ9C0K7 418 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 SPRTNQ9H040 489 aaPredicted RBP11.72□□□□□ -0.53
TRA2B-213ENST00000485530 PCBD2Q9H0N5 130 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 POLR1BQ9H9Y6 1135 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 PDE7BQ9NP56 450 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 FBXO8Q9NRD0 319 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 TMEM184CQ9NVA4 438 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 DNAJC11Q9NVH1 559 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 PISDQ9UG56 409 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 SNX7Q9UNH6 387 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 SNRNP200O75643 2136 aaKnown RBP11.71□□□□□ -0.53
TRA2B-213ENST00000485530 FEZF1A0PJY2 475 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 PABPN1LA6NDY0 278 aaKnown RBP11.71□□□□□ -0.53
TRA2B-213ENST00000485530 B4E171 279 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 E7EQ34 232 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 STX16-NPEPL1H3BU86 382 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 K7EPI3 171 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 OR7A17O14581 309 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 STX16O14662 325 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 HAT1O14929 419 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 SMIM24O75264 130 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 WFS1O76024 890 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 DXOO77932 396 aaKnown RBP11.71□□□□□ -0.53
TRA2B-213ENST00000485530 IPO13O94829 963 aaKnown RBP11.71□□□□□ -0.53
TRA2B-213ENST00000485530 TNFSF15O95150 251 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 FKBP9O95302 570 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 S100BP04271 92 aaPredicted RBP11.71□□□□□ -0.53
TRA2B-213ENST00000485530 CPA3P15088 417 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 ZNF28P17035 718 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 TSPAN8P19075 237 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 IMPDH1P20839 514 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 ATP5F1P24539 256 aaPredicted RBP11.71□□□□□ -0.53
TRA2B-213ENST00000485530 TSPAN7P41732 249 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 CDH13P55290 713 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 MAGOHP61326 146 aaKnown RBP11.71□□□□□ -0.53
TRA2B-213ENST00000485530 PCDH1Q08174 1060 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 VAC14Q08AM6 782 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 CDC16Q13042 620 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 CCDC153Q494R4 210 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 CES4AQ5XG92 561 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 ATG14Q6ZNE5 492 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 PRICKLE2Q7Z3G6 844 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 CROCCP2Q86T23 111 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 C17orf64Q86WR6 236 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 TEX9Q8N6V9 391 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 SLC38A9Q8NBW4 561 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 KCNE4Q8WWG9 221 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 SLC5A11Q8WWX8 675 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 USP7Q93009 1102 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 FAM111AQ96PZ2 611 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 OR2A5Q96R48 311 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 HAUS8Q9BT25 410 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 C1QTNF3Q9BXJ4 246 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 TRIM4Q9C037 500 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 SSU72Q9NP77 194 aaKnown RBP11.71□□□□□ -0.53
TRA2B-213ENST00000485530 ASCL3Q9NQ33 180 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 FGF21Q9NSA1 209 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 STARD5Q9NSY2 213 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 SOHLH2Q9NX45 425 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 SLC39A1Q9NY26 324 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 SENP1Q9P0U3 644 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 PCTPQ9UKL6 214 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 ZNF490Q9ULM2 529 aaPredicted RBP11.71□□□□□ -0.53
TRA2B-213ENST00000485530 PCDHGA8Q9Y5G5 932 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 B3GALT1Q9Y5Z6 326 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 ACTL7BQ9Y614 415 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 KCNE2Q9Y6J6 123 aa11.71□□□□□ -0.53
TRA2B-213ENST00000485530 BOD1L1Q8NFC6 3051 aa11.71□□□□□ -0.54
TRA2B-213ENST00000485530 PCM1Q15154 2024 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 A0A0J9YVX5 310 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 CDRT15L2A8MXV6 281 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 KLK10O43240 276 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 MED26O95402 600 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 STATHP02808 62 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 RPS17P08708 135 aaKnown RBP11.7□□□□□ -0.54
TRA2B-213ENST00000485530 MSL3P1P0C860 447 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 C1GALT1C1LP0DN25 315 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 FGF5P12034 268 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 ALDH3A1P30838 453 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 BCL6P41182 706 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 CASP2P42575 452 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 CCR10P46092 362 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 MAPK10P53779 464 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 GABREP78334 506 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 NFKB2Q00653 900 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 RELAQ04206 551 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 FOXM1Q08050 763 aa11.7□□□□□ -0.54
TRA2B-213ENST00000485530 EIF3IQ13347 325 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms