RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 H7BY64 318 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 WDPCPO95876 746 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 KRT14P02533 472 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 UQCRHP07919 91 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 MPC1LP0DKB6 136 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 TDGF1P3P51864 188 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 SRSF11Q05519 484 aaKnown RBP18.24■□□□□ 0.51
COL27A1-205ENST00000485397 THOC5Q13769 683 aaKnown RBP18.24■□□□□ 0.51
COL27A1-205ENST00000485397 THEMIS2Q5TEJ8 643 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 TTC27Q6P3X3 843 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 TMEM205Q6UW68 189 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 FBXO15Q8NCQ5 510 aaPredicted RBP18.24■□□□□ 0.51
COL27A1-205ENST00000485397 PRAP1Q96NZ9 151 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.24■□□□□ 0.51
COL27A1-205ENST00000485397 ZNF700Q9H0M5 742 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 MKL2Q9ULH7 1088 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 ZCWPW2A0A1B0GU75 182 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 SDR42E2A6NKP2 422 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 GOLGA8MH3BSY2 632 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 GFYI3L273 518 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 TXNDC9O14530 226 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 PCDH17O14917 1159 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 KIF5CO60282 957 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 IMPA1P29218 277 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 RELAQ04206 551 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 FAM53BQ14153 422 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 ARMC3Q5W041 872 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 RIPOR1Q6ZS17 1223 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 ZNF662Q6ZS27 426 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 TICAM1Q8IUC6 712 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 NR4A3Q92570 626 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 KCNJ9Q92806 393 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 IMMP1LQ96LU5 166 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 GPR21Q99679 349 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 CCDC68Q9H2F9 335 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 KLHL42Q9P2K6 505 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 DHRS7Q9Y394 339 aa18.23■□□□□ 0.51
COL27A1-205ENST00000485397 IGHV3-20A0A0C4DH32 117 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 A0A1B0GUH1 482 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 MAGEB16A2A368 324 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 ZBTB14O43829 449 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 CCDC175P0C221 793 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 MLNP12872 115 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 SKIV2L2P42285 1042 aaKnown RBP18.22■□□□□ 0.51
COL27A1-205ENST00000485397 SLC1A2P43004 574 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 AVPR1BP47901 424 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 NDUFA9Q16795 377 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 HIBCHQ6NVY1 386 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-205ENST00000485397 PIWIL4Q7Z3Z4 852 aaKnown RBP18.22■□□□□ 0.51
COL27A1-205ENST00000485397 VN1R4Q7Z5H5 301 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 CPNE9Q8IYJ1 553 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 AGGF1Q8N302 714 aaeCLIP18.22■□□□□ 0.51
COL27A1-205ENST00000485397 TRIM58Q8NG06 486 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 OR9A4Q8NGU2 314 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 CD200R1Q8TD46 325 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 SERPINB12Q96P63 405 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 MACROD1Q9BQ69 325 aa18.22■□□□□ 0.51
COL27A1-205ENST00000485397 ARHGAP10A1A4S6 786 aa18.21■□□□□ 0.51
COL27A1-205ENST00000485397 C8orf89P0DMQ9 161 aa18.21■□□□□ 0.51
COL27A1-205ENST00000485397 ENO3P13929 434 aaPredicted RBP18.21■□□□□ 0.51
COL27A1-205ENST00000485397 MPP1Q00013 466 aa18.21■□□□□ 0.51
COL27A1-205ENST00000485397 UBE2R2Q712K3 238 aaPredicted RBP18.21■□□□□ 0.51
COL27A1-205ENST00000485397 PRSS41Q7RTY9 318 aa18.21■□□□□ 0.51
COL27A1-205ENST00000485397 SLC34A3Q8N130 599 aa18.21■□□□□ 0.51
COL27A1-205ENST00000485397 MCUQ8NE86 351 aa18.21■□□□□ 0.51
COL27A1-205ENST00000485397 EBNA1BP2Q99848 306 aaKnown RBP18.21■□□□□ 0.51
COL27A1-205ENST00000485397 TUBB6Q9BUF5 446 aa18.21■□□□□ 0.51
COL27A1-205ENST00000485397 VN1R1Q9GZP7 353 aa18.21■□□□□ 0.51
COL27A1-205ENST00000485397 C20orf96Q9NUD7 363 aaPredicted RBP18.21■□□□□ 0.51
COL27A1-205ENST00000485397 TMEM184CQ9NVA4 438 aa18.21■□□□□ 0.51
COL27A1-205ENST00000485397 CENPEQ02224 2701 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 OR2W5A6NFC9 320 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 ENO4A6NNW6 628 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 SEC24DO94855 1032 aaPredicted RBP18.2■□□□□ 0.5
COL27A1-205ENST00000485397 HAUS5O94927 633 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 ICAM2P13598 275 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 MST1P26927 711 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 INAQ16352 499 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 MFSD4BQ5TF39 518 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 ABHD17BQ5VST6 288 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 SP5Q6BEB4 398 aaPredicted RBP18.2■□□□□ 0.5
COL27A1-205ENST00000485397 GFRALQ6UXV0 394 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 LANCL3Q6ZV70 420 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 SRRM1Q8IYB3 904 aaKnown RBP18.2■□□□□ 0.5
COL27A1-205ENST00000485397 METTL21AQ8WXB1 218 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 RELTQ969Z4 430 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 MAGOHBQ96A72 148 aaKnown RBP18.2■□□□□ 0.5
COL27A1-205ENST00000485397 CYTH2Q99418 400 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 XAB2Q9HCS7 855 aaKnown RBP18.2■□□□□ 0.5
COL27A1-205ENST00000485397 CCDC177Q9NQR7 707 aaPredicted RBP18.2■□□□□ 0.5
COL27A1-205ENST00000485397 STMN3Q9NZ72 180 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 FBXO5Q9UKT4 447 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 SH2B3Q9UQQ2 575 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 ENTPD4Q9Y227 616 aa18.2■□□□□ 0.5
COL27A1-205ENST00000485397 OR5H15A6NDH6 313 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 A8MUI8 341 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 H0YIG0 161 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 NSA2O95478 260 aaKnown RBP18.19■□□□□ 0.5
COL27A1-205ENST00000485397 PRF1P14222 555 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 IL1RNP18510 177 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms