RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 SHCBP1LQ9BZQ2 653 aa3□□□□□ -1.93
PKP4-212ENST00000483881 DCLK3Q9C098 648 aa3□□□□□ -1.93
PKP4-212ENST00000483881 SLC25A18Q9H1K4 315 aa3□□□□□ -1.93
PKP4-212ENST00000483881 MUC13Q9H3R2 512 aa3□□□□□ -1.93
PKP4-212ENST00000483881 GOLPH3LQ9H4A5 285 aa3□□□□□ -1.93
PKP4-212ENST00000483881 PLEKHA4Q9H4M7 779 aa3□□□□□ -1.93
PKP4-212ENST00000483881 THAP9Q9H5L6 903 aa3□□□□□ -1.93
PKP4-212ENST00000483881 ATP13A3Q9H7F0 1226 aa3□□□□□ -1.93
PKP4-212ENST00000483881 C12orf4Q9NQ89 552 aa3□□□□□ -1.93
PKP4-212ENST00000483881 COPG2Q9UBF2 871 aa3□□□□□ -1.93
PKP4-212ENST00000483881 PLEKHB1Q9UF11 243 aaPredicted RBP3□□□□□ -1.93
PKP4-212ENST00000483881 VPS28Q9UK41 221 aa3□□□□□ -1.93
PKP4-212ENST00000483881 PIN4Q9Y237 131 aaKnown RBP3□□□□□ -1.93
PKP4-212ENST00000483881 PSAT1Q9Y617 370 aa3□□□□□ -1.93
PKP4-212ENST00000483881 KCNE2Q9Y6J6 123 aa3□□□□□ -1.93
PKP4-212ENST00000483881 KIDINS220Q9ULH0 1771 aa3□□□□□ -1.93
PKP4-212ENST00000483881 DNAH12Q6ZR08 3092 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 RP1L1Q8IWN7 2480 aaPredicted RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 PHLPP2Q6ZVD8 1323 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 C5orf42Q9H799 3197 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 CD163L1Q9NR16 1453 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 A0A0U1RQV5 110 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 A0A1B0GTQ1 180 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 A0A1W2PPC1 479 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 KANSL1LA0AUZ9 987 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 ARHGEF37A1IGU5 675 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 SRRM3A6NNA2 597 aaPredicted RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 ZNF879B4DU55 563 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 SPECC1L-ADORA2AF8WAN1 911 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 H0YGN5 161 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 GATCO43716 136 aaKnown RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 ECE2O60344 883 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 STX10O60499 249 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 SURF6O75683 361 aaKnown RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 GJB3O75712 270 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 CRTAPO75718 401 aaPredicted RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 CDC123O75794 336 aaPredicted RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 IFNA14P01570 189 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 IFNB1P01574 187 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 OPN1LWP04000 364 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 HIST1H2ABP04908 130 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 TPBGLP0DKB5 382 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 PRPS2P11908 318 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 POLR2CP19387 275 aaPredicted RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 HIST1H2ADP20671 130 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 AGAP20933 346 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 TNFRSF8P28908 595 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 MAPK4P31152 587 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 HOXA13P31271 388 aaPredicted RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 STX2P32856 288 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 RPL3P39023 403 aaKnown RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 PRCPP42785 496 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 PTGER3P43115 390 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 PPP3CCP48454 512 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 AMTP48728 403 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 HARS2P49590 506 aaKnown RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 STARP49675 285 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 METAP2P50579 478 aaKnown RBP eCLIP2.99□□□□□ -1.93
PKP4-212ENST00000483881 CLCN5P51795 746 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 PSMC5P62195 406 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 EGR4Q05215 589 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 PPATQ06203 517 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 ASPHQ12797 758 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 TMEM115Q12893 351 aaPredicted RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 COASYQ13057 564 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 PLD1Q13393 1074 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 XRCC4Q13426 336 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 RIPK1Q13546 671 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 ACVR2BQ13705 512 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 KLF9Q13886 244 aaPredicted RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 HLFQ16534 295 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 ZNF667Q5HYK9 610 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 C1orf141Q5JVX7 400 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 DUPD1Q68J44 220 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 KIAA1161Q6NSJ0 714 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 TSSK4Q6SA08 328 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 MARK2Q7KZI7 788 aaKnown RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 HIST3H2AQ7L7L0 130 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 TECPR1Q7Z6L1 1165 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 SLFN11Q7Z7L1 901 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 PRPF39Q86UA1 669 aaKnown RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 TLK2Q86UE8 772 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 KBTBD6Q86V97 674 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 ERICH1Q86X53 443 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 CLVS1Q8IUQ0 354 aaPredicted RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 MCEMP1Q8IX19 187 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 CCDC36Q8IYA8 594 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 ST13P4Q8IZP2 240 aaPredicted RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 PARP16Q8N5Y8 322 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 IQCF1Q8N6M8 205 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 C10orf53Q8N6V4 93 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 ANKFN1Q8N957 763 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 MRPL43Q8N983 215 aaKnown RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 CNNM3Q8NE01 707 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 ZNF548Q8NEK5 533 aaPredicted RBP2.99□□□□□ -1.93
PKP4-212ENST00000483881 TRPV1Q8NER1 839 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 FANK1Q8TC84 345 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 ADAMTS16Q8TE57 1224 aa2.99□□□□□ -1.93
PKP4-212ENST00000483881 RAD51AP1Q96B01 352 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms