RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 FLOT2Q14254 428 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 TMIGD1Q6UXZ0 262 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 OR13H1Q8NG92 308 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 OR4K1Q8NGD4 311 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 CHTF18Q8WVB6 975 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 STARD8Q92502 1023 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 GATA6Q92908 595 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 ASB9Q96DX5 294 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 AIF1LQ9BQI0 150 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 CCR8P51685 355 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 TRAP1Q12931 704 aaKnown RBP25.26■■□□□ 1.63
SHOX2-204ENST00000483851 DPY19L1Q2PZI1 675 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 GALNT18Q6P9A2 607 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 RD3Q7Z3Z2 195 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 DCP2Q8IU60 420 aaKnown RBP25.26■■□□□ 1.63
SHOX2-204ENST00000483851 LINC01555Q8NAE3 123 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 OR52E1Q8NGJ3 308 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 RHBGQ9H310 441 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 DMRT3Q9NQL9 472 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 PCDHB11Q9Y5F2 797 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 OR52A4PA6NMU1 304 aa25.25■■□□□ 1.63
SHOX2-204ENST00000483851 PRPS1L1P21108 318 aa25.25■■□□□ 1.63
SHOX2-204ENST00000483851 RPS9P46781 194 aaKnown RBP25.25■■□□□ 1.63
SHOX2-204ENST00000483851 TRIM25Q14258 630 aaKnown RBP25.25■■□□□ 1.63
SHOX2-204ENST00000483851 PAGE3Q5JUK9 113 aa25.25■■□□□ 1.63
SHOX2-204ENST00000483851 ZFP1Q6P2D0 407 aa25.25■■□□□ 1.63
SHOX2-204ENST00000483851 MSANTD1Q6ZTZ1 278 aa25.25■■□□□ 1.63
SHOX2-204ENST00000483851 CADM4Q8NFZ8 388 aa25.25■■□□□ 1.63
SHOX2-204ENST00000483851 SLC13A3Q8WWT9 602 aa25.25■■□□□ 1.63
SHOX2-204ENST00000483851 TMEM168Q9H0V1 697 aa25.25■■□□□ 1.63
SHOX2-204ENST00000483851 C6orf203Q9P0P8 240 aaPredicted RBP25.25■■□□□ 1.63
SHOX2-204ENST00000483851 SPTY2D1-AS1A0A0U1RR47 76 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 RASGRP1O95267 797 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 SLC6A2P23975 617 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 ACTR1BP42025 376 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 SLC7A2P52569 658 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 ACTR1AP61163 376 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 ABATP80404 500 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 PRDX1Q06830 199 aaKnown RBP25.24■■□□□ 1.63
SHOX2-204ENST00000483851 ILF3Q12906 894 aaKnown RBP eCLIP25.24■■□□□ 1.63
SHOX2-204ENST00000483851 LPCAT4Q643R3 524 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 PQLC1Q8N2U9 271 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 LMNTD1Q8N9Z9 388 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 ZFPM2Q8WW38 1151 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 MIEF2Q96C03 454 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 KLHL4Q9C0H6 718 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 VCX3BQ9H321 246 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 TBC1D17Q9HA65 648 aa25.24■■□□□ 1.63
SHOX2-204ENST00000483851 SCHIP1Q9P0W5 487 aaPredicted RBP25.24■■□□□ 1.63
SHOX2-204ENST00000483851 A6NCN8 305 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 PGRP06401 933 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 F3P13726 295 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 SHMT2P34897 504 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 ASMTP46597 345 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 RPS13P62277 151 aaKnown RBP25.23■■□□□ 1.63
SHOX2-204ENST00000483851 FAM174BQ3ZCQ3 159 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 SFT2D3Q587I9 215 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 OGFRL1Q5TC84 451 aaPredicted RBP25.23■■□□□ 1.63
SHOX2-204ENST00000483851 HID1Q8IV36 788 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 RIMKLAQ8IXN7 391 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 SLC22A18ASQ8N1D0 253 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 SLC45A3Q96JT2 553 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 TMEM74Q96NL1 305 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 NR1H4Q96RI1 486 aaPredicted RBP25.23■■□□□ 1.63
SHOX2-204ENST00000483851 ORAI3Q9BRQ5 295 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 ICKQ9UPZ9 632 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 HSD17B1P14061 328 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 PTX3P26022 381 aaPredicted RBP25.23■■□□□ 1.63
SHOX2-204ENST00000483851 PEX2P28328 305 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 MSX2P35548 267 aaPredicted RBP25.23■■□□□ 1.63
SHOX2-204ENST00000483851 PWP1Q13610 501 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 SLC15A3Q8IY34 581 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 RNF175Q8N4F7 328 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 C2orf73Q8N5S3 287 aaPredicted RBP25.23■■□□□ 1.63
SHOX2-204ENST00000483851 RNF148Q8N7C7 305 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 GPBAR1Q8TDU6 330 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 IER2Q9BTL4 223 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 ACAT2Q9BWD1 397 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 OR6C2Q9NZP2 312 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 PNMA8BQ9ULN7 279 aaPredicted RBP25.23■■□□□ 1.63
SHOX2-204ENST00000483851 PCDHA9Q9Y5H5 950 aa25.23■■□□□ 1.63
SHOX2-204ENST00000483851 PRORSD1PA6NEY8 169 aa25.22■■□□□ 1.63
SHOX2-204ENST00000483851 NDUFS2O75306 463 aa25.22■■□□□ 1.63
SHOX2-204ENST00000483851 THEGLP0DJG4 465 aa25.22■■□□□ 1.63
SHOX2-204ENST00000483851 AK4P27144 223 aaPredicted RBP25.22■■□□□ 1.63
SHOX2-204ENST00000483851 REEP5Q00765 189 aa25.22■■□□□ 1.63
SHOX2-204ENST00000483851 TMEM126BQ8IUX1 230 aa25.22■■□□□ 1.63
SHOX2-204ENST00000483851 PJA1Q8NG27 643 aa25.22■■□□□ 1.63
SHOX2-204ENST00000483851 OR2A1Q8NGT9 310 aa25.22■■□□□ 1.63
SHOX2-204ENST00000483851 GSDMCQ9BYG8 508 aa25.22■■□□□ 1.63
SHOX2-204ENST00000483851 TPSD1Q9BZJ3 242 aa25.22■■□□□ 1.63
SHOX2-204ENST00000483851 METTL12A8MUP2 240 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 PRICKLE3O43900 615 aaPredicted RBP25.21■■□□□ 1.63
SHOX2-204ENST00000483851 CCNDBP1O95273 360 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 ETHE1O95571 254 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 CAPNS1P04632 268 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 HRH2P25021 359 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 BLKP51451 505 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 HNRNPFP52597 415 aaKnown RBP25.21■■□□□ 1.63
SHOX2-204ENST00000483851 MAPKAPK3Q16644 382 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms