RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 LRBAP50851 2863 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 IGHV1-45A0A0A0MS14 117 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 NSG1A0A0A6YYJ2 146 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 WISP2O76076 250 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 ITGAMP11215 1152 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 GABRB3P28472 473 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 SOX11P35716 441 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 PCOLCEQ15113 449 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 HSP90AA5PQ58FG0 334 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 CCDC137Q6PK04 289 aaKnown RBP17.09■□□□□ 0.33
ATG4B-221ENST00000483778 VN1R4Q7Z5H5 301 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 ADCK2Q7Z695 626 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 OR9A4Q8NGU2 314 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 EEF1AKMT1Q8WVE0 214 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 KCNJ9Q92806 393 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 C5orf34Q96MH7 638 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 TAAR6Q96RI8 345 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 AARSD1Q9BTE6 412 aaKnown RBP17.09■□□□□ 0.33
ATG4B-221ENST00000483778 EPS8L2Q9H6S3 715 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 XAB2Q9HCS7 855 aaKnown RBP17.09■□□□□ 0.33
ATG4B-221ENST00000483778 AGPAT4Q9NRZ5 378 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 IARS2Q9NSE4 1012 aaKnown RBP17.09■□□□□ 0.33
ATG4B-221ENST00000483778 KLHL42Q9P2K6 505 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 CDC14AQ9UNH5 594 aa17.09■□□□□ 0.33
ATG4B-221ENST00000483778 IGHV3-20A0A0C4DH32 117 aa17.08■□□□□ 0.32
ATG4B-221ENST00000483778 A0A1W2PQ72 361 aa17.08■□□□□ 0.32
ATG4B-221ENST00000483778 LRRTM2O43300 516 aa17.08■□□□□ 0.32
ATG4B-221ENST00000483778 VPS26AO75436 327 aa17.08■□□□□ 0.32
ATG4B-221ENST00000483778 HEXBP07686 556 aa17.08■□□□□ 0.32
ATG4B-221ENST00000483778 EZRP15311 586 aaKnown RBP17.08■□□□□ 0.32
ATG4B-221ENST00000483778 HSD17B2P37059 387 aa17.08■□□□□ 0.32
ATG4B-221ENST00000483778 ELOAQ14241 798 aaKnown RBP17.08■□□□□ 0.32
ATG4B-221ENST00000483778 TLR1Q15399 786 aa17.08■□□□□ 0.32
ATG4B-221ENST00000483778 LONRF1Q17RB8 773 aa17.08■□□□□ 0.32
ATG4B-221ENST00000483778 ZXDCQ2QGD7 858 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-221ENST00000483778 ARMC3Q5W041 872 aa17.08■□□□□ 0.32
ATG4B-221ENST00000483778 UBE2R2Q712K3 238 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-221ENST00000483778 IGDCC3Q8IVU1 814 aa17.08■□□□□ 0.32
ATG4B-221ENST00000483778 PBKQ96KB5 322 aa17.08■□□□□ 0.32
ATG4B-221ENST00000483778 NDNQ99608 321 aa17.08■□□□□ 0.32
ATG4B-221ENST00000483778 TGIF2Q9GZN2 237 aa17.08■□□□□ 0.32
ATG4B-221ENST00000483778 VPS9D1Q9Y2B5 631 aa17.08■□□□□ 0.32
ATG4B-221ENST00000483778 LOC102723996A0A087X1L8 192 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 FEZF1A0PJY2 475 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 ZBTB14O43829 449 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 LCMT2O60294 686 aaKnown RBP17.07■□□□□ 0.32
ATG4B-221ENST00000483778 BMP10O95393 424 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 SERPINA7P05543 415 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 ST13P50502 369 aaKnown RBP17.07■□□□□ 0.32
ATG4B-221ENST00000483778 CDKN2DP55273 166 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 RELAQ04206 551 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 NAA25Q14CX7 972 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 TTLL9Q3SXZ7 439 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 MSS51Q4VC12 460 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 RBM20Q5T481 1227 aaKnown RBP17.07■□□□□ 0.32
ATG4B-221ENST00000483778 THEMIS2Q5TEJ8 643 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 GARNL3Q5VVW2 1013 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 ZNF324BQ6AW86 544 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-221ENST00000483778 TMEM205Q6UW68 189 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 LANCL3Q6ZV70 420 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 RERGQ96A58 199 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-221ENST00000483778 MVB12AQ96EY5 273 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 IMMP1LQ96LU5 166 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 DRC3Q9H069 523 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 ZNF700Q9H0M5 742 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 PLAC1Q9HBJ0 212 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 MKKSQ9NPJ1 570 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-221ENST00000483778 SLC17A6Q9P2U8 582 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 MKL2Q9ULH7 1088 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 PDE10AQ9Y233 779 aa17.07■□□□□ 0.32
ATG4B-221ENST00000483778 PHF2O75151 1096 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 CCNDBP1O95273 360 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 ANXA5P08758 320 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 CXCR2P25025 360 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 TNFSF10P50591 281 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 CSNK1G2P78368 415 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 ABATP80404 500 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 RNASEH2BQ5TBB1 312 aaKnown RBP17.06■□□□□ 0.32
ATG4B-221ENST00000483778 PAQR3Q6TCH7 311 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 VPS50Q96JG6 964 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 SLX1AQ9BQ83 275 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 VN1R1Q9GZP7 353 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 ATG10Q9H0Y0 220 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 CCDC68Q9H2F9 335 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 TMEM184CQ9NVA4 438 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 JRKLQ9Y4A0 524 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 GTF3C1Q12789 2109 aa17.06■□□□□ 0.32
ATG4B-221ENST00000483778 MYO9AB2RTY4 2548 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 ZNF839A8K0R7 811 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 DNAJB6O75190 326 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 WDPCPO95876 746 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 ENO3P13929 434 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-221ENST00000483778 EDN3P14138 238 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 KCNK10P57789 538 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 ARG2P78540 354 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 FAM53BQ14153 422 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 PHKG1Q16816 387 aa17.05■□□□□ 0.32
ATG4B-221ENST00000483778 RPUSD3Q6P087 351 aaKnown RBP17.05■□□□□ 0.32
ATG4B-221ENST00000483778 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.05■□□□□ 0.32
ATG4B-221ENST00000483778 KCT2Q8NC54 265 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms