RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 MAN1A2O60476 641 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 PRAMEF2O60811 474 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 PSIP1O75475 530 aaKnown RBP13.17□□□□□ -0.3
VARS-226ENST00000483275 RASAL1O95294 804 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 C8orf89P0DMQ9 161 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 HTR1EP28566 365 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 CDSNQ15517 529 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 INAQ16352 499 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 MINDY4Q4G0A6 757 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 ABHD17BQ5VST6 288 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 MRNIPQ6NTE8 343 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 CENPUQ71F23 418 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 MRGPRGQ86SM5 289 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 REXO1L1PQ8IX06 675 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 BEST3Q8N1M1 668 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 ZCCHC10Q8TBK6 192 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 MAGEC3Q8TD91 643 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 ZNF480Q8WV37 535 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 HAS2Q92819 552 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 RERGQ96A58 199 aaPredicted RBP13.17□□□□□ -0.3
VARS-226ENST00000483275 MOCOSQ96EN8 888 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 IMMP1LQ96LU5 166 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 FRMD8P1Q9BZ68 369 aaPredicted RBP13.17□□□□□ -0.3
VARS-226ENST00000483275 MKKSQ9NPJ1 570 aaPredicted RBP13.17□□□□□ -0.3
VARS-226ENST00000483275 KLHL1Q9NR64 748 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 BFARQ9NZS9 450 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 TINAGQ9UJW2 476 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 CDC14AQ9UNH5 594 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 LOC102723996A0A087X1L8 192 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 E5RI56 91 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 FAM227AF5H4B4 570 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 PRPF4O43172 522 aaKnown RBP eCLIP13.16□□□□□ -0.3
VARS-226ENST00000483275 CATP04040 527 aaKnown RBP13.16□□□□□ -0.3
VARS-226ENST00000483275 EZRP15311 586 aaKnown RBP13.16□□□□□ -0.3
VARS-226ENST00000483275 IL1RNP18510 177 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 FDXRP22570 491 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 ATP5DP30049 168 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 CA7P43166 264 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 CLCN7P51798 805 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 BTBD16Q32M84 506 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 THEMIS2Q5TEJ8 643 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 ZNF470Q6ECI4 717 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 TMEM205Q6UW68 189 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 GSTA5Q7RTV2 222 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 SDCCAG8Q86SQ7 713 aaPredicted RBP13.16□□□□□ -0.3
VARS-226ENST00000483275 TXLNBQ8N3L3 684 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 MVB12AQ96EY5 273 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 CCDC138Q96M89 665 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 SIGLEC12Q96PQ1 595 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 KIFC1Q9BW19 673 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 FBXO6Q9NRD1 293 aaPredicted RBP13.16□□□□□ -0.3
VARS-226ENST00000483275 FAM114A2Q9NRY5 505 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 ABI3Q9P2A4 366 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 SUCOQ9UBS9 1254 aaKnown RBP13.16□□□□□ -0.3
VARS-226ENST00000483275 SOX13Q9UN79 622 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 MRFAP1Q9Y605 127 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 GTF3C1Q12789 2109 aa13.16□□□□□ -0.3
VARS-226ENST00000483275 ZNF860A6NHJ4 632 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 E7ENX8 843 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 H7BY64 318 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 C19orf84I3L1E1 186 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 SGK494L7N484 410 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 SLC19A2O60779 497 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 ESR1P03372 595 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 PKMP14618 531 aaKnown RBP13.15□□□□□ -0.3
VARS-226ENST00000483275 NPY2RP49146 381 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 EMP3P54852 163 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 ADORA2A-AS1P86434 159 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 TAP2Q03519 686 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 PRDX1Q06830 199 aaKnown RBP13.15□□□□□ -0.3
VARS-226ENST00000483275 ART3Q13508 389 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 NAA25Q14CX7 972 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 C3AR1Q16581 482 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 ZNF766Q5HY98 468 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 RNF187Q5TA31 235 aaPredicted RBP13.15□□□□□ -0.3
VARS-226ENST00000483275 ANKRD22Q5VYY1 191 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 CASC4Q6P4E1 433 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 ZNF549Q6P9A3 640 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 BNC2Q6ZN30 1099 aaPredicted RBP13.15□□□□□ -0.3
VARS-226ENST00000483275 MBOAT1Q6ZNC8 495 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 RIPOR1Q6ZS17 1223 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 PIWIL4Q7Z3Z4 852 aaKnown RBP13.15□□□□□ -0.3
VARS-226ENST00000483275 VN1R4Q7Z5H5 301 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 DENND6AQ8IWF6 608 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 SUN3Q8TAQ9 357 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 PRAP1Q96NZ9 151 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 TGIF2Q9GZN2 237 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 STMN3Q9NZ72 180 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 MED16Q9Y2X0 877 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 NF1P21359 2839 aa13.15□□□□□ -0.3
VARS-226ENST00000483275 MTORP42345 2549 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 FEZF1A0PJY2 475 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 H3BMM5 538 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 PHF2O75151 1096 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 CDC123O75794 336 aaPredicted RBP13.14□□□□□ -0.31
VARS-226ENST00000483275 CCNDBP1O95273 360 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 CRYABP02511 175 aaKnown RBP13.14□□□□□ -0.31
VARS-226ENST00000483275 COX6B1P14854 86 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 COILP38432 576 aaPredicted RBP13.14□□□□□ -0.31
VARS-226ENST00000483275 XCR1P46094 333 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms