RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CDK14O94921 469 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 CTSAP10619 480 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 IRF1P10914 325 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 ENO3P13929 434 aaPredicted RBP7.51□□□□□ -1.21
SNX13-208ENST00000482558 JUPP14923 745 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 EN2P19622 333 aaPredicted RBP7.51□□□□□ -1.21
SNX13-208ENST00000482558 CHRM3P20309 590 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 KCNA5P22460 613 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 ARL3P36405 182 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 KRTAP10-2P60368 255 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 POLR2LP62875 67 aaKnown RBP7.51□□□□□ -1.21
SNX13-208ENST00000482558 TIAL1Q01085 375 aaKnown RBP eCLIP7.51□□□□□ -1.21
SNX13-208ENST00000482558 CREB5Q02930 508 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 TRAF2Q12933 501 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 MAD2L1Q13257 205 aaPredicted RBP7.51□□□□□ -1.21
SNX13-208ENST00000482558 MED21Q13503 144 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 OR4D1Q15615 310 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 AGKQ53H12 422 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 OGFRL1Q5TC84 451 aaPredicted RBP7.51□□□□□ -1.21
SNX13-208ENST00000482558 CPZQ66K79 652 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 CAPRIN2Q6IMN6 1127 aaKnown RBP7.51□□□□□ -1.21
SNX13-208ENST00000482558 ANO7Q6IWH7 933 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 IZUMO2Q6UXV1 221 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.51□□□□□ -1.21
SNX13-208ENST00000482558 TAS2R42Q7RTR8 314 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 R3HCC1LQ7Z5L2 792 aaKnown RBP7.51□□□□□ -1.21
SNX13-208ENST00000482558 PDSS2Q86YH6 399 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 GATAD2AQ86YP4 633 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 SPPL2CQ8IUH8 684 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 ARMC8Q8IUR7 673 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 RYBPQ8N488 228 aaPredicted RBP7.51□□□□□ -1.21
SNX13-208ENST00000482558 TMEM199Q8N511 208 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 MINDY1Q8N5J2 469 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 DDI1Q8WTU0 396 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 TWIST2Q8WVJ9 160 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 FUBP1Q96AE4 644 aaKnown RBP7.51□□□□□ -1.21
SNX13-208ENST00000482558 CCDC124Q96CT7 223 aaKnown RBP7.51□□□□□ -1.21
SNX13-208ENST00000482558 MYEOVQ96EZ4 313 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 ALG14Q96F25 216 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 ZNF641Q96N77 438 aaPredicted RBP7.51□□□□□ -1.21
SNX13-208ENST00000482558 GPR21Q99679 349 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 HTATIP2Q9BUP3 242 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 CPEB1Q9BZB8 566 aaKnown RBP7.51□□□□□ -1.21
SNX13-208ENST00000482558 P2RY12Q9H244 342 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 CDIP1Q9H305 208 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 SDR39U1Q9NRG7 319 aaPredicted RBP7.51□□□□□ -1.21
SNX13-208ENST00000482558 GKN1Q9NS71 199 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 CLDND1Q9NY35 253 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 NDUFA13Q9P0J0 144 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 VPS51Q9UID3 782 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 FBXL7Q9UJT9 491 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 RAB26Q9ULW5 256 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 PPIL1Q9Y3C6 166 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 DNAJC15Q9Y5T4 150 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 ADAMTS20P59510 1910 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 TRBV5-4A0A0C4DH59 114 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 A0A0J9YYE9 177 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 C2orf78A6NCI8 922 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 UBXN8O00124 270 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 QSOX1O00391 747 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 BTN3A1O00481 513 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 MAN2B1O00754 1011 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 PIP5K1BO14986 540 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 GRM6O15303 877 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 CFLARO15519 480 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 BUD23O43709 281 aaKnown RBP7.5□□□□□ -1.21
SNX13-208ENST00000482558 ECI2O75521 394 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 PDE5AO76074 875 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 CD160O95971 181 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 OTCP00480 354 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 TIMP1P01033 207 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 TRBC1P01850 177 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 C8BP07358 591 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 F7P08709 466 aaPredicted RBP7.5□□□□□ -1.21
SNX13-208ENST00000482558 CSF1P09603 554 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 PIM1P11309 404 aaPredicted RBP7.5□□□□□ -1.21
SNX13-208ENST00000482558 UQCRBP14927 111 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 EEF1DP29692 281 aaKnown RBP7.5□□□□□ -1.21
SNX13-208ENST00000482558 SPAM1P38567 509 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 BCL6P41182 706 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 CSKP41240 450 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 CCR10P46092 362 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 RGRP47804 291 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 THOP1P52888 689 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 MC1RQ01726 317 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 PEX6Q13608 980 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 SEMA3AQ14563 771 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 TRIP10Q15642 601 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 TCTN1Q2MV58 587 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 KIF19Q2TAC6 998 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 TRIM60Q495X7 471 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 AASDHQ4L235 1098 aaPredicted RBP7.5□□□□□ -1.21
SNX13-208ENST00000482558 PDCD4Q53EL6 469 aaKnown RBP7.5□□□□□ -1.21
SNX13-208ENST00000482558 ARHGAP15Q53QZ3 475 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 TCHHL1Q5QJ38 904 aaPredicted RBP7.5□□□□□ -1.21
SNX13-208ENST00000482558 TMEM198Q66K66 360 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 REP15Q6BDI9 236 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 PTRHD1Q6GMV3 140 aaKnown RBP7.5□□□□□ -1.21
SNX13-208ENST00000482558 GALNT18Q6P9A2 607 aa7.5□□□□□ -1.21
SNX13-208ENST00000482558 MACC1Q6ZN28 852 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms