RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 PRAMEF4O60810 478 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 TRIM13O60858 407 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 C1GALT1C1LP0DN25 315 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 FGF3P11487 239 aaPredicted RBP12.68□□□□□ -0.38
HDAC1-208ENST00000482310 PCNAP12004 261 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 CHN1P15882 459 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 CD22P20273 847 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 NR1D1P20393 614 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 GRK3P35626 688 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 BCL6P41182 706 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 VSX2P58304 361 aaPredicted RBP12.68□□□□□ -0.38
HDAC1-208ENST00000482310 GABREP78334 506 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 GPS2Q13227 327 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 PRAMEF9Q5VWM5 478 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 ATG9BQ674R7 924 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 FRMPD2BQ6IN97 320 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 ZNF425Q6IV72 752 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 SLCO4C1Q6ZQN7 724 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 TMPRSS7Q7RTY8 843 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 AGR3Q8TD06 166 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 SREK1Q8WXA9 508 aaKnown RBP12.68□□□□□ -0.38
HDAC1-208ENST00000482310 CCT6BQ92526 530 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 TCTN2Q96GX1 697 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 SLC41A2Q96JW4 573 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 MACROD1Q9BQ69 325 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 AIF1LQ9BQI0 150 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 GATA5Q9BWX5 397 aaPredicted RBP12.68□□□□□ -0.38
HDAC1-208ENST00000482310 GSTO2Q9H4Y5 243 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 SYNPO2LQ9H987 977 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 PELI2Q9HAT8 420 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 FANCEQ9HB96 536 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 TMEM184CQ9NVA4 438 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 GPRC5BQ9NZH0 403 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 BTRCQ9Y297 605 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 RNF11Q9Y3C5 154 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 FIS1Q9Y3D6 152 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 LOC105369274A0A096LPK9 316 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 LOC102723532A0A0G2JNH3 316 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 OR2A25A4D2G3 310 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 PLD2O14939 933 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 HGSO14964 777 aaPredicted RBP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 TOX3O15405 576 aaPredicted RBP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 LCMT2O60294 686 aaKnown RBP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 H2AFYO75367 372 aaKnown RBP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 SH3BGRLO75368 114 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 LYPLA1O75608 230 aaPredicted RBP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 OR4F21O95013 312 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 FKBP9O95302 570 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 EZRP15311 586 aaKnown RBP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 DNAJB13P59910 316 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 REEP5Q00765 189 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 ASPHQ12797 758 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 TRAF3Q13114 568 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 DDX39BQ13838 428 aaKnown RBP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 NAA25Q14CX7 972 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 PRAMEF17Q5VTA0 474 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 ADNP2Q6IQ32 1131 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 FRMD7Q6ZUT3 714 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 RNF44Q7L0R7 432 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 SYVN1Q86TM6 617 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 KMT5CQ86Y97 462 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 MCATQ8IVS2 390 aaKnown RBP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 OR4N4Q8N0Y3 316 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 D2HGDHQ8N465 521 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 RNF175Q8N4F7 328 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 DNAJC22Q8N4W6 341 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 OR4F6Q8NGB9 312 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 WDR36Q8NI36 951 aaKnown RBP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 DYDC1Q8WWB3 177 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 ZUFSPQ96AP4 578 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 MTFMTQ96DP5 389 aaKnown RBP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 PTCD3Q96EY7 689 aaKnown RBP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 LIN37Q96GY3 246 aaPredicted RBP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 KCNA7Q96RP8 456 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 ZFYVE21Q9BQ24 234 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 MID1IP1Q9NPA3 183 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 FGF21Q9NSA1 209 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 GEMIN8Q9NWZ8 242 aaKnown RBP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 SIDT1Q9NXL6 827 aaKnown RBP12.67□□□□□ -0.38
HDAC1-208ENST00000482310 SLC39A1Q9NY26 324 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 ANKMY1Q9P2S6 941 aa12.67□□□□□ -0.38
HDAC1-208ENST00000482310 H0YGG7 62 aa12.66□□□□□ -0.38
HDAC1-208ENST00000482310 P2RX6O15547 441 aa12.66□□□□□ -0.38
HDAC1-208ENST00000482310 CRCPO75575 148 aa12.66□□□□□ -0.38
HDAC1-208ENST00000482310 CHRNGP07510 517 aa12.66□□□□□ -0.38
HDAC1-208ENST00000482310 DHRS4L1P0CG22 281 aa12.66□□□□□ -0.38
HDAC1-208ENST00000482310 ERVPABLB-1P60509 514 aa12.66□□□□□ -0.38
HDAC1-208ENST00000482310 ARF3P61204 181 aaPredicted RBP12.66□□□□□ -0.38
HDAC1-208ENST00000482310 RPS15AP62244 130 aaKnown RBP12.66□□□□□ -0.38
HDAC1-208ENST00000482310 LCP2Q13094 533 aa12.66□□□□□ -0.38
HDAC1-208ENST00000482310 CPSF6Q16630 551 aaKnown RBP eCLIP12.66□□□□□ -0.38
HDAC1-208ENST00000482310 SGO1Q5FBB7 561 aa12.66□□□□□ -0.38
HDAC1-208ENST00000482310 TCHHL1Q5QJ38 904 aaPredicted RBP12.66□□□□□ -0.38
HDAC1-208ENST00000482310 CES4AQ5XG92 561 aa12.66□□□□□ -0.38
HDAC1-208ENST00000482310 TTC19Q6DKK2 380 aaPredicted RBP12.66□□□□□ -0.38
HDAC1-208ENST00000482310 LETMD1Q6P1Q0 360 aa12.66□□□□□ -0.38
HDAC1-208ENST00000482310 FBXO42Q6P3S6 717 aa12.66□□□□□ -0.38
HDAC1-208ENST00000482310 GPRIN3Q6ZVF9 776 aa12.66□□□□□ -0.38
HDAC1-208ENST00000482310 MILR1Q7Z6M3 343 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms