RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 SRSF11Q05519 484 aaKnown RBP10.6□□□□□ -0.71
VTI1A-204ENST00000480057 PRDX1Q06830 199 aaKnown RBP10.6□□□□□ -0.71
VTI1A-204ENST00000480057 ILF3Q12906 894 aaKnown RBP eCLIP10.6□□□□□ -0.71
VTI1A-204ENST00000480057 TSTA3Q13630 321 aaPredicted RBP10.6□□□□□ -0.71
VTI1A-204ENST00000480057 FXNQ16595 210 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 MAPKAPK3Q16644 382 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 FAM174BQ3ZCQ3 159 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 TPRG1LQ5T0D9 272 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 ICE2Q659A1 982 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 DUS1LQ6P1R4 473 aaKnown RBP10.6□□□□□ -0.71
VTI1A-204ENST00000480057 LAYNQ6UX15 382 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 DLEU7Q6UYE1 221 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 Q7L0L9 218 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 IQCHQ86VS3 1027 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 SYT12Q8IV01 421 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.6□□□□□ -0.71
VTI1A-204ENST00000480057 DEFB123Q8N688 67 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 LINC01555Q8NAE3 123 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 OR13H1Q8NG92 308 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 OR52E1Q8NGJ3 308 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 GPBAR1Q8TDU6 330 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 ZUFSPQ96AP4 578 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 TMEM125Q96AQ2 219 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 VPS33AQ96AX1 596 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 SLC22A18Q96BI1 424 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 DUS3LQ96G46 650 aaKnown RBP10.6□□□□□ -0.71
VTI1A-204ENST00000480057 MTERF1Q99551 399 aaKnown RBP10.6□□□□□ -0.71
VTI1A-204ENST00000480057 SARGQ9BW04 601 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 GPR174Q9BXC1 333 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 KCNH6Q9H252 994 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 PRDM8Q9NQV8 689 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 AHSPQ9NZD4 102 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 NKX1-2Q9UD57 310 aaPredicted RBP10.6□□□□□ -0.71
VTI1A-204ENST00000480057 TBC1D29Q9UFV1 150 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 ICKQ9UPZ9 632 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 SH2B3Q9UQQ2 575 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 L3MBTL1Q9Y468 752 aa10.6□□□□□ -0.71
VTI1A-204ENST00000480057 CFAP20Q9Y6A4 193 aaKnown RBP10.6□□□□□ -0.71
VTI1A-204ENST00000480057 PLXND1Q9Y4D7 1925 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 A0A096LPI6 279 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 KIR2DS5A0A0G2JLQ3 304 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 A0A0G2JNG1 304 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 SPTY2D1-AS1A0A0U1RR47 76 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 TRBC2A0A5B9 178 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 METTL12A8MUP2 240 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 C9JVG2 144 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 KIR2DS3K7RE56 304 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 NME4O00746 187 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 F3P13726 295 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 ANPEPP15144 967 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 CD27P26842 260 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 ACTR1BP42025 376 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 TRPC1P48995 793 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 ARFIP1P53367 373 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 ACTR1AP61163 376 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 DDX39BQ13838 428 aaKnown RBP10.59□□□□□ -0.71
VTI1A-204ENST00000480057 KIR2DS5Q14953 304 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 SPANXN4Q5MJ08 99 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 LRIF1Q5T3J3 769 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 NANOGP8Q6NSW7 305 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 SLC2A7Q6PXP3 512 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 MAMSTRQ6ZN01 415 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 IKBIPQ70UQ0 350 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 PTRH1Q86Y79 214 aaKnown RBP10.59□□□□□ -0.71
VTI1A-204ENST00000480057 TMEM126BQ8IUX1 230 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 SIX5Q8N196 739 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 METTL4Q8N3J2 472 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 TBC1D19Q8N5T2 526 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 MFSD2AQ8NA29 543 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 OR8J2Q8NGG1 315 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 OR2A1Q8NGT9 310 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 GTF2H4Q92759 462 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 TSACCQ96A04 125 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-204ENST00000480057 KLHDC7BQ96G42 594 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 ITCHQ96J02 903 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 QRFPRQ96P65 431 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 OR52E6Q96RD3 313 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 PRPF18Q99633 342 aaKnown RBP10.59□□□□□ -0.71
VTI1A-204ENST00000480057 CGREF1Q99674 301 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 ORAI3Q9BRQ5 295 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 NANOGQ9H9S0 305 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 POT1Q9NUX5 634 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 TMEM184CQ9NVA4 438 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 FAM120CQ9NX05 1096 aaKnown RBP10.59□□□□□ -0.71
VTI1A-204ENST00000480057 CMTM6Q9NX76 183 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 SCHIP1Q9P0W5 487 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-204ENST00000480057 MCM8Q9UJA3 840 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 CA5BQ9Y2D0 317 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 PCDHGA2Q9Y5H1 932 aa10.59□□□□□ -0.71
VTI1A-204ENST00000480057 PCM1Q15154 2024 aa10.58□□□□□ -0.72
VTI1A-204ENST00000480057 TRBV5-3A0A0A0MS03 114 aa10.58□□□□□ -0.72
VTI1A-204ENST00000480057 ANKDD1BA6NHY2 528 aa10.58□□□□□ -0.72
VTI1A-204ENST00000480057 AQP12BA6NM10 295 aa10.58□□□□□ -0.72
VTI1A-204ENST00000480057 OR52A4PA6NMU1 304 aa10.58□□□□□ -0.72
VTI1A-204ENST00000480057 H0Y3Z8 333 aa10.58□□□□□ -0.72
VTI1A-204ENST00000480057 PCDH7O60245 1069 aa10.58□□□□□ -0.72
VTI1A-204ENST00000480057 NDUFS2O75306 463 aa10.58□□□□□ -0.72
VTI1A-204ENST00000480057 CLEC3AO75596 197 aa10.58□□□□□ -0.72
VTI1A-204ENST00000480057 SORBS2O94875 1100 aaKnown RBP10.58□□□□□ -0.72
VTI1A-204ENST00000480057 ETHE1O95571 254 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms