RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 MUM1Q2TAK8 710 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 C18orf21Q32NC0 220 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-206ENST00000478214 MROH9Q5TGP6 573 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 RAPH1Q70E73 1250 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 OVCH1Q7RTY7 1134 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 VN1R4Q7Z5H5 301 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 ABHD11Q8NFV4 315 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 UHMK1Q8TAS1 419 aaKnown RBP14.86□□□□□ -0.03
HMGA1-206ENST00000478214 THAP4Q8WY91 577 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 PTERQ96BW5 349 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 RHBDF1Q96CC6 855 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 GEMIN8Q9NWZ8 242 aaKnown RBP14.86□□□□□ -0.03
HMGA1-206ENST00000478214 SLC22A14Q9Y267 594 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 HEATR5BQ9P2D3 2071 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 BOD1L1Q8NFC6 3051 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 KCNE1BA0A087WTH5 132 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 LCMT2O60294 686 aaKnown RBP14.85□□□□□ -0.03
HMGA1-206ENST00000478214 CD63P08962 238 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 PIM1P11309 404 aaPredicted RBP14.85□□□□□ -0.03
HMGA1-206ENST00000478214 OTX2P32243 289 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 BCL6P41182 706 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 FOLR3P41439 243 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 GDF5P43026 501 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 HNMTP50135 292 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 CCR8P51685 355 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 EMP3P54852 163 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 SNRPNP63162 240 aaKnown RBP14.85□□□□□ -0.03
HMGA1-206ENST00000478214 MEF2AQ02078 507 aaPredicted RBP14.85□□□□□ -0.03
HMGA1-206ENST00000478214 DLG1Q12959 904 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 KCNAB2Q13303 367 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 CATSPEREQ5SY80 951 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 CPZQ66K79 652 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 THOC6Q86W42 341 aaKnown RBP14.85□□□□□ -0.03
HMGA1-206ENST00000478214 GPSM1Q86YR5 675 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 ZNF843Q8N446 348 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 ARHGEF39Q8N4T4 335 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 OR2Y1Q8NGV0 311 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 SLC5A11Q8WWX8 675 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 NEIL2Q969S2 332 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 KIAA1191Q96A73 305 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 FKBP10Q96AY3 582 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 TSNARE1Q96NA8 513 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 MACROD1Q9BQ69 325 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 L2HGDHQ9H9P8 463 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 ZNF304Q9HCX3 659 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 CTSFQ9UBX1 484 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 SPTA1P02549 2419 aa14.85□□□□□ -0.03
HMGA1-206ENST00000478214 ARGFXA6NJG6 315 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 DNAJB5O75953 348 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 ALBP02768 609 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 C2P06681 752 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 UMODP07911 640 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 TFEBP19484 476 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 GRK3P35626 688 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 SLC6A12P48065 614 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 KCNC1P48547 511 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 PMS2P54278 862 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 IRF9Q00978 393 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 CHAF1BQ13112 559 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 ATP1A4Q13733 1029 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 NKG7Q16617 165 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 FBXO48Q5FWF7 155 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 GARNL3Q5VVW2 1013 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 PRMT9Q6P2P2 845 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 SHISA6Q6ZSJ9 500 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 TBC1D1Q86TI0 1168 aaPredicted RBP14.84□□□□□ -0.03
HMGA1-206ENST00000478214 ZNF740Q8NDX6 193 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 OR4K1Q8NGD4 311 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 SLC44A1Q8WWI5 657 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 COL26A1Q96A83 441 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 THAP11Q96EK4 314 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 TRIM55Q9BYV6 548 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 ADNPQ9H2P0 1102 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 SPNS1Q9H2V7 528 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 ALG9Q9H6U8 611 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 SNX15Q9NRS6 342 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 IGSF5Q9NSI5 407 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 MRPS2Q9Y399 296 aaKnown RBP14.84□□□□□ -0.03
HMGA1-206ENST00000478214 DYRK1BQ9Y463 629 aa14.84□□□□□ -0.03
HMGA1-206ENST00000478214 TXNDC9O14530 226 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 TAPBPO15533 448 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 FOXS1O43638 330 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 WDR47O94967 919 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 INHBAP08476 426 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 LTA4HP09960 611 aaKnown RBP14.83□□□□□ -0.04
HMGA1-206ENST00000478214 FAM153BP0C7A2 387 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 SFTPCP11686 197 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 FBLP22087 321 aaKnown RBP14.83□□□□□ -0.04
HMGA1-206ENST00000478214 CSRP3P50461 194 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 SSPNQ14714 243 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 FAM153CQ494X1 144 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 TMPRSS11BQ86T26 416 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 ISCA2Q86U28 154 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 RAB43Q86YS6 212 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 APLFQ8IW19 511 aaPredicted RBP14.83□□□□□ -0.04
HMGA1-206ENST00000478214 KLHDC8AQ8IYD2 350 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 CENPLQ8N0S6 344 aaPredicted RBP14.83□□□□□ -0.04
HMGA1-206ENST00000478214 MFSD9Q8NBP5 474 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 KCTD4Q8WVF5 259 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 EXT2Q93063 718 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms