RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ARF3P61204 181 aaPredicted RBP6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 SNRPNP63162 240 aaKnown RBP6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 RUNX1T1Q06455 604 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 BRD3Q15059 726 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 PDK1Q15118 436 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 KRT31Q15323 416 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 GPR33Q49SQ1 333 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 FILIP1LQ4L180 1135 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 FKBP15Q5T1M5 1219 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 GARNL3Q5VVW2 1013 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 KAZNQ674X7 775 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 HEPHL1Q6MZM0 1159 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 ZNF585AQ6P3V2 769 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 LRRC8BQ6P9F7 803 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 PAOXQ6QHF9 649 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 TAX1BP1Q86VP1 789 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 MAP7D3Q8IWC1 876 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 RELL2Q8NC24 303 aaPredicted RBP6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 NEK11Q8NG66 645 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 LINC01560Q8TB33 94 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 ELP5Q8TE02 316 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 CREB3L4Q8TEY5 395 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 RNASE6Q93091 150 aaKnown RBP6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 CABS1Q96KC9 395 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 IL17FQ96PD4 163 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 RNF157Q96PX1 679 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 ISCUQ9H1K1 167 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 ZDHHC11Q9H8X9 412 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 B4GALT7Q9UBV7 327 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 C19orf25Q9UFG5 118 aaPredicted RBP6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 CIDEBQ9UHD4 219 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 ADGRE2Q9UHX3 823 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 RUVBL1Q9Y265 456 aaKnown RBP6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 HEY1Q9Y5J3 304 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 FAM169AQ9Y6X4 670 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 A0A1B0GVC2 190 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 FEZF1A0PJY2 475 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 OR2A25A4D2G3 310 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 MBD3L4A6NDZ8 208 aaPredicted RBP6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 MBD3L5A6NJ08 208 aaPredicted RBP6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 FAM47E-STBD1D6RA91 191 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 CNOT4O95628 575 aaKnown RBP6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 ANXA5P08758 320 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 ERVK-10P10266 1014 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 NFKB1P19838 968 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 ITGALP20701 1170 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 SSR1P43307 286 aaKnown RBP6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 AGTR2P50052 363 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 MLF1P58340 268 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 TAS2R50P59544 299 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 PLOD1Q02809 727 aaPredicted RBP6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 WASHC5Q12768 1159 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 HADHQ16836 314 aaKnown RBP6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 HKDC1Q2TB90 917 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 DPCR1Q3MIW9 517 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 DNAJC21Q5F1R6 531 aaKnown RBP6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 RIPPLY2Q5TAB7 128 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 SLC9A4Q6AI14 798 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 PAPD4Q6PIY7 484 aaKnown RBP6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 POMZP3Q6PJE2 187 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 MICALCLQ6ZW33 695 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 ZNF571Q7Z3V5 609 aaPredicted RBP6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 SERPINA9Q86WD7 417 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 CPNE8Q86YQ8 564 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 SLC13A5Q86YT5 568 aaPredicted RBP6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 HIPK1Q86Z02 1210 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 ARMC10Q8N2F6 343 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 CSNK1A1LQ8N752 337 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 IPMKQ8NFU5 416 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 OR2L3Q8NG85 312 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 OR13C4Q8NGS5 318 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 OR2A1Q8NGT9 310 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 ELMO1Q92556 727 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 RAPGEF5Q92565 580 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 PIGTQ969N2 578 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 TRIM11Q96F44 468 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 FCRL5Q96RD9 977 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 C19orf43Q9BQ61 176 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 USB1Q9BQ65 265 aaKnown RBP6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 DRC3Q9H069 523 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 ATG10Q9H0Y0 220 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 HAUS4Q9H6D7 363 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 FOXD3Q9UJU5 478 aaPredicted RBP6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 PRSS21Q9Y6M0 314 aa6.85□□□□□ -1.31
SPTLC1-205ENST00000477888 MEGF8Q7Z7M0 2845 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 PINLYPA6NC86 204 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 ARHGEF33A8MVX0 844 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 MYO1FO00160 1098 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 CCL22O00626 93 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 PPP1R12AO14974 1030 aaPredicted RBP6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 KCNAB3O43448 404 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 ICMTO60725 284 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 WDR1O75083 606 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 DNAJB6O75190 326 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 AGTP01019 485 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 IGHG3P01860 377 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 PRSS56P0CW18 603 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 KDELR1P24390 212 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 PSMB5P28074 263 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 ARHGAP25P42331 645 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms