RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 SLC45A3Q96JT2 553 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 C10orf90Q96M02 699 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 PCBD2Q9H0N5 130 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 NMRAL1Q9HBL8 299 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 ENAMQ9NRM1 1142 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 CUTCQ9NTM9 273 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 ZNF180Q9UJW8 692 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 PTBP2Q9UKA9 531 aaKnown RBP9.26□□□□□ -0.93
HDAC3-208ENST00000476739 TLK1Q9UKI8 766 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 RNF112Q9ULX5 631 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 IKBKGQ9Y6K9 419 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 AP1M2Q9Y6Q5 423 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 CFAP47Q6ZTR5 3102 aa9.26□□□□□ -0.93
HDAC3-208ENST00000476739 SUPT3HB4E1H0 165 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 SRPX2O60687 465 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-208ENST00000476739 KERAO60938 352 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 CNOT3O75175 753 aaKnown RBP9.25□□□□□ -0.93
HDAC3-208ENST00000476739 SUPT3HO75486 399 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 RFPL1O75677 317 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 KRT38O76015 456 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 KLK3P07288 261 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-208ENST00000476739 PRKAR1AP10644 381 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 VARSP26640 1264 aaKnown RBP9.25□□□□□ -0.93
HDAC3-208ENST00000476739 GGT5P36269 586 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 OR1D4P47884 311 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 AGTR2P50052 363 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 HNMTP50135 292 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 IL10RAQ13651 578 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 ERV3-1Q14264 604 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 GRM7Q14831 915 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 NAA25Q14CX7 972 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 PRTGQ2VWP7 1150 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 TAF1BQ53T94 588 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-208ENST00000476739 TCTE1Q5JU00 501 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 C16orf46Q6P387 395 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 PCSK4Q6UW60 755 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 COX15Q7KZN9 410 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 TMPRSS11BQ86T26 416 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 KLHDC8AQ8IYD2 350 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 CYP4X1Q8N118 509 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 ARHGEF39Q8N4T4 335 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 CSNK1A1LQ8N752 337 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 ENDOVQ8N8Q3 282 aaKnown RBP9.25□□□□□ -0.93
HDAC3-208ENST00000476739 TTC29Q8NA56 475 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-208ENST00000476739 OR4K1Q8NGD4 311 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 AENQ8WTP8 325 aaKnown RBP9.25□□□□□ -0.93
HDAC3-208ENST00000476739 MZB1Q8WU39 189 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 KIAA1143Q96AT1 154 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-208ENST00000476739 MOCOSQ96EN8 888 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 HAUS8Q9BT25 410 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 NDC1Q9BTX1 674 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 ACTL8Q9H568 366 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 WWOXQ9NZC7 414 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 CD274Q9NZQ7 290 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 NDOR1Q9UHB4 597 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 TBK1Q9UHD2 729 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 RUVBL1Q9Y265 456 aaKnown RBP9.25□□□□□ -0.93
HDAC3-208ENST00000476739 MRPS2Q9Y399 296 aaKnown RBP9.25□□□□□ -0.93
HDAC3-208ENST00000476739 PCDHGA6Q9Y5G7 932 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 MAU2Q9Y6X3 613 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 PCSK5Q92824 1860 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 LOC400499M0QZD8 3231 aa9.25□□□□□ -0.93
HDAC3-208ENST00000476739 KCNE1BA0A087WTH5 132 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 A0A1B0GX78 115 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 LRRC14BA6NHZ5 514 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 ZNF891A8MT65 544 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-208ENST00000476739 C21orf140B9A014 251 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 GOLGA8RI6L899 631 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 MAP2K7O14733 419 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 DSCR3O14972 297 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 CREG1O75629 220 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 STK16O75716 305 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 SNRPAP09012 282 aaKnown RBP9.24□□□□□ -0.93
HDAC3-208ENST00000476739 HBQ1P09105 142 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 SBK3P0C264 359 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 EPORP19235 508 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 AGXTP21549 392 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 HRH2P25021 359 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 CNTFP26441 200 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 PTPN4P29074 926 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 HSD17B3P37058 310 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 SLCO1A2P46721 670 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 CCR8P51685 355 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 ARSFP54793 590 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 DCDP81605 110 aaKnown RBP9.24□□□□□ -0.93
HDAC3-208ENST00000476739 RELAQ04206 551 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 ACAP2Q15057 778 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 FAM83EQ2M2I3 478 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 LINC00303Q3SY05 128 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 TECRLQ5HYJ1 363 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 MLIPQ5VWP3 458 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 SULT1C3Q6IMI6 304 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 WDR93Q6P2C0 686 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 NXPE4Q6UWF7 544 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 PRSS41Q7RTY9 318 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 ZSCAN1Q8NBB4 408 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 MFSD9Q8NBP5 474 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 OR2W6PQ8NHA6 318 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 RHEBL1Q8TAI7 183 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 PROKR1Q8TCW9 393 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms