RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 RERGQ96A58 199 aaPredicted RBP15.45■□□□□ 0.06
COL1A1-205ENST00000476387 PSMG3-AS1Q96PY0 264 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 MFRPQ9BY79 579 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 ARL15Q9NXU5 204 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 NXT1Q9UKK6 140 aaKnown RBP15.45■□□□□ 0.06
COL1A1-205ENST00000476387 LOC105369274A0A096LPK9 316 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 IGKV1-8A0A0C4DH67 115 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 LOC102723532A0A0G2JNH3 316 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 TCRBV9S1A1TA0A576 114 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 HYKKA2RU49 373 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 AGPSO00116 658 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 TUBB4AP04350 444 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 ENO2P09104 434 aaPredicted RBP15.44■□□□□ 0.06
COL1A1-205ENST00000476387 HRH2P25021 359 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 PGGT1BP53609 377 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 SLC7A5Q01650 507 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 RAPSNQ13702 412 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 PHKG1Q16816 387 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 MUM1Q2TAK8 710 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 C3orf62Q6ZUJ4 267 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 C17orf64Q86WR6 236 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 LRRC56Q8IYG6 542 aaPredicted RBP15.44■□□□□ 0.06
COL1A1-205ENST00000476387 OR4N4Q8N0Y3 316 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 NKAPQ8N5F7 415 aaKnown RBP15.44■□□□□ 0.06
COL1A1-205ENST00000476387 METTL27Q8N6F8 245 aaPredicted RBP15.44■□□□□ 0.06
COL1A1-205ENST00000476387 MNS1Q8NEH6 495 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 TM9SF4Q92544 642 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 ALKBH8Q96BT7 664 aaKnown RBP15.44■□□□□ 0.06
COL1A1-205ENST00000476387 TRIM44Q96DX7 344 aaPredicted RBP15.44■□□□□ 0.06
COL1A1-205ENST00000476387 CABS1Q96KC9 395 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 SLC29A3Q9BZD2 475 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 ATG10Q9H0Y0 220 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 ATP13A2Q9NQ11 1180 aa15.44■□□□□ 0.06
COL1A1-205ENST00000476387 CUEDC1Q9NWM3 386 aaPredicted RBP15.44■□□□□ 0.06
COL1A1-205ENST00000476387 H0YGG7 62 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 STX2P32856 288 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 MAGEA4P43358 317 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 ARF3P61204 181 aaPredicted RBP15.43■□□□□ 0.06
COL1A1-205ENST00000476387 AIMP2Q13155 320 aaKnown RBP15.43■□□□□ 0.06
COL1A1-205ENST00000476387 NAE1Q13564 534 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 ZNF460Q14592 562 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 NKG7Q16617 165 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 FHL5Q5TD97 284 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 CAPN13Q6MZZ7 669 aaPredicted RBP15.43■□□□□ 0.06
COL1A1-205ENST00000476387 FBXO42Q6P3S6 717 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 ZDHHC24Q6UX98 284 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 COX15Q7KZN9 410 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 CTAGE3PQ8IX95 158 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 CSNK1A1LQ8N752 337 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 ATL1Q8WXF7 558 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 TSPAN17Q96FV3 270 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 PDLIM5Q96HC4 596 aaKnown RBP15.43■□□□□ 0.06
COL1A1-205ENST00000476387 CPNE1Q99829 537 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 ZNF552Q9H707 407 aaPredicted RBP15.43■□□□□ 0.06
COL1A1-205ENST00000476387 GPAMQ9HCL2 828 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 SMYD2Q9NRG4 433 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 B3GNT3Q9Y2A9 372 aa15.43■□□□□ 0.06
COL1A1-205ENST00000476387 ICE1Q9Y2F5 2266 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 HIVEP3Q5T1R4 2406 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 CNTRLQ7Z7A1 2325 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 ESYT3A0FGR9 886 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 CXorf49A8MYA2 514 aaPredicted RBP15.42■□□□□ 0.06
COL1A1-205ENST00000476387 H7BY64 318 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 TXNDC9O14530 226 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 HAT1O14929 419 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 PIAS1O75925 651 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 GUCA1CO95843 209 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 GP5P40197 560 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 FOXL2P58012 376 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 TAS2R39P59534 338 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 POU4F1Q01851 419 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 RELAQ04206 551 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 TRADDQ15628 312 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 PRR30Q53SZ7 412 aaPredicted RBP15.42■□□□□ 0.06
COL1A1-205ENST00000476387 PRMT9Q6P2P2 845 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 LCTLQ6UWM7 567 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 IQCKQ8N0W5 287 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 VPS50Q96JG6 964 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 PRAP1Q96NZ9 151 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 SPSB2Q99619 263 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 HAUS8Q9BT25 410 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 LRRC1Q9BTT6 524 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 POPDC3Q9HBV1 291 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 TMEM184CQ9NVA4 438 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 LUZP4Q9P127 313 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 FBXL4Q9UKA2 621 aa15.42■□□□□ 0.06
COL1A1-205ENST00000476387 BLACEA4D250 179 aa15.41■□□□□ 0.06
COL1A1-205ENST00000476387 NPEPPSL1A6NEC2 478 aa15.41■□□□□ 0.06
COL1A1-205ENST00000476387 FAM159BA6NKW6 160 aa15.41■□□□□ 0.06
COL1A1-205ENST00000476387 VSTM2BA6NLU5 285 aa15.41■□□□□ 0.06
COL1A1-205ENST00000476387 PRPF4O43172 522 aaKnown RBP eCLIP15.41■□□□□ 0.06
COL1A1-205ENST00000476387 AGFG2O95081 481 aa15.41■□□□□ 0.06
COL1A1-205ENST00000476387 GRK3P35626 688 aa15.41■□□□□ 0.06
COL1A1-205ENST00000476387 OR1D4P47884 311 aa15.41■□□□□ 0.06
COL1A1-205ENST00000476387 EMP3P54852 163 aa15.41■□□□□ 0.06
COL1A1-205ENST00000476387 GPX6P59796 221 aa15.41■□□□□ 0.06
COL1A1-205ENST00000476387 RPS15AP62244 130 aaKnown RBP15.41■□□□□ 0.06
COL1A1-205ENST00000476387 GUCY2DQ02846 1103 aa15.41■□□□□ 0.06
COL1A1-205ENST00000476387 USP10Q14694 798 aaKnown RBP15.41■□□□□ 0.06
COL1A1-205ENST00000476387 PRTGQ2VWP7 1150 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms