RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 ETNPPLQ8TBG4 499 aa4.44□□□□□ -1.7
PRKD3-208ENST00000475912 SAAL1Q96ER3 474 aa4.44□□□□□ -1.7
PRKD3-208ENST00000475912 PPP1R13BQ96KQ4 1090 aa4.44□□□□□ -1.7
PRKD3-208ENST00000475912 QRFPRQ96P65 431 aa4.44□□□□□ -1.7
PRKD3-208ENST00000475912 PIP5K1AQ99755 562 aa4.44□□□□□ -1.7
PRKD3-208ENST00000475912 LRRC1Q9BTT6 524 aa4.44□□□□□ -1.7
PRKD3-208ENST00000475912 POLR3CQ9BUI4 534 aaPredicted RBP4.44□□□□□ -1.7
PRKD3-208ENST00000475912 APOL6Q9BWW8 343 aa4.44□□□□□ -1.7
PRKD3-208ENST00000475912 ITPAQ9BY32 194 aa4.44□□□□□ -1.7
PRKD3-208ENST00000475912 CXCL16Q9H2A7 254 aa4.44□□□□□ -1.7
PRKD3-208ENST00000475912 NXF3Q9H4D5 531 aaKnown RBP4.44□□□□□ -1.7
PRKD3-208ENST00000475912 C8orf33Q9H7E9 229 aaPredicted RBP4.44□□□□□ -1.7
PRKD3-208ENST00000475912 TRPV4Q9HBA0 871 aa4.44□□□□□ -1.7
PRKD3-208ENST00000475912 ASAH2Q9NR71 780 aa4.44□□□□□ -1.7
PRKD3-208ENST00000475912 SUCLA2Q9P2R7 463 aaPredicted RBP4.44□□□□□ -1.7
PRKD3-208ENST00000475912 SEC63Q9UGP8 760 aaKnown RBP4.44□□□□□ -1.7
PRKD3-208ENST00000475912 TCF19Q9Y242 345 aa4.44□□□□□ -1.7
PRKD3-208ENST00000475912 ASXL3Q9C0F0 2248 aa4.44□□□□□ -1.7
PRKD3-208ENST00000475912 ACACAQ13085 2346 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 A6NCN8 305 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 CASTOR2A6NHX0 329 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 IFIT3O14879 490 aaKnown RBP4.43□□□□□ -1.7
PRKD3-208ENST00000475912 DOK2O60496 412 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 PTP4A3O75365 173 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 GFPT2O94808 682 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 ACADMP11310 421 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 CD59P13987 128 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 PSMA4P25789 261 aaKnown RBP4.43□□□□□ -1.7
PRKD3-208ENST00000475912 CDKN1AP38936 164 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 PTGER3P43115 390 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 DRG2P55039 364 aaKnown RBP4.43□□□□□ -1.7
PRKD3-208ENST00000475912 NAP1L1P55209 391 aaKnown RBP4.43□□□□□ -1.7
PRKD3-208ENST00000475912 EIF3BP55884 814 aaKnown RBP4.43□□□□□ -1.7
PRKD3-208ENST00000475912 ARF3P61204 181 aaPredicted RBP4.43□□□□□ -1.7
PRKD3-208ENST00000475912 ARF1P84077 181 aaKnown RBP4.43□□□□□ -1.7
PRKD3-208ENST00000475912 PDE1CQ14123 709 aaPredicted RBP4.43□□□□□ -1.7
PRKD3-208ENST00000475912 KARSQ15046 597 aaKnown RBP4.43□□□□□ -1.7
PRKD3-208ENST00000475912 TEAD2Q15562 447 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 IMMTQ16891 758 aaKnown RBP4.43□□□□□ -1.7
PRKD3-208ENST00000475912 SIRPB2Q5JXA9 342 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 PDSS1Q5T2R2 415 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 C20orf194Q5TEA3 1177 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 FBXL22Q6P050 247 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 RAD9BQ6WBX8 426 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 DPPA4Q7L190 304 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 NIPA1Q7RTP0 329 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 SLC38A5Q8WUX1 472 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 PSPC1Q8WXF1 523 aaKnown RBP4.43□□□□□ -1.7
PRKD3-208ENST00000475912 CRYGNQ8WXF5 182 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 PERPQ96FX8 193 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 CPB2Q96IY4 423 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 ACOX2Q99424 681 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 ZNF577Q9BSK1 485 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 PCGF1Q9BSM1 259 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 PRORYQ9H606 182 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 DIAPH3Q9NSV4 1193 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 NRBP2Q9NSY0 501 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 MTRRQ9UBK8 725 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 HAO1Q9UJM8 370 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 KLHL20Q9Y2M5 609 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 SPAG17Q6Q759 2223 aa4.43□□□□□ -1.7
PRKD3-208ENST00000475912 ASCC3Q8N3C0 2202 aaKnown RBP4.42□□□□□ -1.7
PRKD3-208ENST00000475912 ANTXRLA6NF34 631 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 ZNF197O14709 1029 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 TSPAN1O60635 241 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 SEC24AO95486 1093 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 PRAMEF12O95522 483 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 APBB3O95704 486 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 MLYCDO95822 493 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 SPARCP09486 303 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 POLR2CP19387 275 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-208ENST00000475912 U2AF2P26368 475 aaKnown RBP eCLIP4.42□□□□□ -1.74e-8■■□□□ 12.8
PRKD3-208ENST00000475912 RDXP35241 583 aaKnown RBP4.42□□□□□ -1.7
PRKD3-208ENST00000475912 BSGP35613 385 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 ARL3P36405 182 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 FASLGP48023 281 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 DHPSP49366 369 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-208ENST00000475912 CLNS1AP54105 237 aaKnown RBP4.42□□□□□ -1.7
PRKD3-208ENST00000475912 RPL7AP62424 266 aaKnown RBP4.42□□□□□ -1.7
PRKD3-208ENST00000475912 ROR1Q01973 937 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 NAB2Q15742 525 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 MEA1Q16626 185 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 OR7E24Q6IFN5 339 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 KRTAP5-1Q6L8H4 278 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 TTI2Q6NXR4 508 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 FAM171BQ6P995 826 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 CWC27Q6UX04 472 aaKnown RBP4.42□□□□□ -1.7
PRKD3-208ENST00000475912 CD300LGQ6UXG3 332 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 GPR180Q86V85 440 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 NRROSQ86YC3 692 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 CNNM3Q8NE01 707 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 RPLP0P6Q8NHW5 317 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 CTCFLQ8NI51 663 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-208ENST00000475912 TMEM255BQ8WV15 326 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 IGSF8Q969P0 613 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 ZNF501Q96CX3 271 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-208ENST00000475912 DUX3Q96PT4 197 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 FNBP1Q96RU3 617 aa4.42□□□□□ -1.7
PRKD3-208ENST00000475912 GTPBP2Q9BX10 602 aaKnown RBP4.42□□□□□ -1.7
PRKD3-208ENST00000475912 NUSAP1Q9BXS6 441 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms