RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ORAI3Q9BRQ5 295 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SLC35A5Q9BS91 424 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GHRLQ9UBU3 117 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 KCNK6Q9Y257 313 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 A0A1W2PRQ8 180 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 RNF13O43567 381 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 IFNA2P01563 188 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CLCN4P51793 760 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PPP1R8Q12972 351 aaKnown RBP12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TIGD6Q17RP2 521 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 FAM110CQ1W6H9 321 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PAOXQ6QHF9 649 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 OR8D2Q9GZM6 311 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 UTS2RQ9UKP6 389 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CORO1CQ9ULV4 474 aaPredicted RBP12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SULT1B1O43704 296 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 AOC2O75106 756 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CLEC3BP05452 202 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TACSTD2P09758 323 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GSTT2BP0CG30 244 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SUSD1Q6UWL2 747 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GPR20Q99678 358 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 L2HGDHQ9H9P8 463 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 WNT6Q9Y6F9 365 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 XKP51811 444 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TXNDC8Q6A555 127 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 OR1F2PQ96R84 312 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 MIPEPQ99797 713 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SEMA6CQ9H3T2 930 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TAC3Q9UHF0 121 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 BACE2Q9Y5Z0 518 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TEX13DA0A0J9YY54 714 aaPredicted RBP12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 A0A1W2PRB8 838 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 M0R2N6 131 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 C8GP07360 202 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 MAGEA3P43357 314 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 NIPAL4Q0D2K0 466 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ZNF808Q8N4W9 903 aaPredicted RBP12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TMEM41AQ96HV5 264 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 HINT2Q9BX68 163 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TREM1Q9NP99 234 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ZNF225Q9UK10 706 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 R3HDM2Q9Y2K5 976 aaKnown RBP12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PTPN6P29350 595 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 EEF1A1P68104 462 aaKnown RBP12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SLC1A5Q15758 541 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 EEF1A1P5Q5VTE0 462 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 XYLT1Q86Y38 959 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CBR4Q8N4T8 237 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 RGMAQ96B86 450 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SLC22A18Q96BI1 424 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ARL5BQ96KC2 179 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 LRFN5Q96NI6 719 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CNOT11Q9UKZ1 510 aaKnown RBP12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PLLPQ9Y342 182 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 IFNA21P01568 189 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 BCHEP06276 602 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 BPGMP07738 259 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 FXYD6P3P58550 94 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 DCDC1P59894 354 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SLC16A9Q7RTY1 509 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 HERPUD2Q9BSE4 406 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 C11orf49Q9H6J7 331 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 KCNMB3Q9NPA1 279 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CA14Q9ULX7 337 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PRPF19Q9UMS4 504 aaKnown RBP12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 DIP2AQ14689 1571 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 NIPSNAP2O75323 286 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SLC2A1P11166 492 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ECM1Q16610 540 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SLC35F1Q5T1Q4 408 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 XKRXQ6PP77 449 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ZNF781Q8N8C0 355 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 AENQ8WTP8 325 aaKnown RBP12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CMKLR1Q99788 373 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PPM1HQ9ULR3 514 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 LRRIQ1Q96JM4 1722 aa12.9□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GPR25O00155 361 aa12.9□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ADAMTS3O15072 1205 aa12.9□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PAX3P23760 479 aa12.9□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 RHEBQ15382 184 aa12.9□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FKBP1CQ5VVH2 108 aa12.9□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PDPRQ8NCN5 879 aa12.9□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PGM2Q96G03 612 aa12.9□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 POLR2J3Q9H1A7 115 aaKnown RBP12.9□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NUDT4Q9NZJ9 180 aa12.9□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SLC22A14Q9Y267 594 aa12.9□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 UBIAD1Q9Y5Z9 338 aa12.9□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DOCK8Q8NF50 2099 aa12.9□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FBP2O00757 339 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 RAD51DO75771 328 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SYNGR4O95473 234 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NNATQ16517 81 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DPYSL2Q16555 572 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 OR52E4Q8NGH9 312 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 OR5J2Q8NH18 312 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NCOA3Q9Y6Q9 1424 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 IGFBP1P08833 259 aaPredicted RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 HK1P19367 917 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms