RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 PCM1Q15154 2024 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 E5RI56 91 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 ZSCAN9O15535 394 aaPredicted RBP8.7□□□□□ -1.02
SF3A1-206ENST00000471037 HCRTR1O43613 425 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 CNOT3O75175 753 aaKnown RBP8.7□□□□□ -1.02
SF3A1-206ENST00000471037 FTH1P02794 183 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 ALDOAP04075 364 aaKnown RBP8.7□□□□□ -1.02
SF3A1-206ENST00000471037 UMODP07911 640 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 UGT2B7P16662 529 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 PDHA2P29803 388 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 CCNFP41002 786 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 SKIV2L2P42285 1042 aaKnown RBP8.7□□□□□ -1.02
SF3A1-206ENST00000471037 MAGOHP61326 146 aaKnown RBP8.7□□□□□ -1.02
SF3A1-206ENST00000471037 ZIC1Q15915 447 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 MLIPQ5VWP3 458 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 RAPH1Q70E73 1250 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 PPP1R32Q7Z5V6 425 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 CUZD1Q86UP6 607 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 LCA5Q86VQ0 697 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 SRRM1Q8IYB3 904 aaKnown RBP8.7□□□□□ -1.02
SF3A1-206ENST00000471037 SLC34A3Q8N130 599 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 ZADH2Q8N4Q0 377 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 CLDN19Q8N6F1 224 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 ST6GALNAC3Q8NDV1 305 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 FLVCR1-AS1Q8TAF5 88 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 N4BP2L2Q92802 583 aaPredicted RBP8.7□□□□□ -1.02
SF3A1-206ENST00000471037 PTERQ96BW5 349 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 ZBTB9Q96C00 473 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 OLFM1Q99784 485 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 HGH1Q9BTY7 390 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 KLHL25Q9H0H3 589 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 XKR8Q9H6D3 395 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 SSU72Q9NP77 194 aaKnown RBP8.7□□□□□ -1.02
SF3A1-206ENST00000471037 AGPAT4Q9NRZ5 378 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 MKS1Q9NXB0 559 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 IFT80Q9P2H3 777 aaPredicted RBP8.7□□□□□ -1.02
SF3A1-206ENST00000471037 KLHL42Q9P2K6 505 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 NDOR1Q9UHB4 597 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 GPN3Q9UHW5 284 aaPredicted RBP8.7□□□□□ -1.02
SF3A1-206ENST00000471037 ICKQ9UPZ9 632 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 NTNG1Q9Y2I2 539 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 ABCA12Q86UK0 2595 aa8.7□□□□□ -1.02
SF3A1-206ENST00000471037 PRRC2CQ9Y520 2896 aaKnown RBP8.7□□□□□ -1.02
SF3A1-206ENST00000471037 FER1L5A0AVI2 2057 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 A0A087X1B8 175 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 A0A096LPK6 155 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 A0A0J9YY10 115 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 A0A1W2PPM1 405 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 LIN7AO14910 233 aaPredicted RBP8.69□□□□□ -1.02
SF3A1-206ENST00000471037 KPNA5O15131 536 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 NIPSNAP2O75323 286 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 C2P06681 752 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 PYGBP11216 843 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 COL6A2P12110 1019 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 KRT4P19013 534 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 CHRM3P20309 590 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 SAT1P21673 171 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 SHMT2P34897 504 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 SLC26A3P40879 764 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 GCGRP47871 477 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 CDKN2DP55273 166 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 SLC18A2Q05940 514 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 AIMP2Q13155 320 aaKnown RBP8.69□□□□□ -1.02
SF3A1-206ENST00000471037 PRKG2Q13237 762 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 PDAP1Q13442 181 aaKnown RBP8.69□□□□□ -1.02
SF3A1-206ENST00000471037 DEFB110Q30KQ9 67 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 TTLL9Q3SXZ7 439 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 NKAIN1Q4KMZ8 207 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 C1orf189Q5VU69 101 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 C1QL3Q5VWW1 255 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 TLDC1Q6P9B6 456 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 IGFL2Q6UWQ7 119 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 MTERF4Q7Z6M4 381 aaKnown RBP8.69□□□□□ -1.02
SF3A1-206ENST00000471037 CMC1Q7Z7K0 106 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 TBC1D1Q86TI0 1168 aaPredicted RBP8.69□□□□□ -1.02
SF3A1-206ENST00000471037 TRIM73Q86UV7 250 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 EXOC3L1Q86VI1 746 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 CEP97Q8IW35 865 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 PHC3Q8NDX5 983 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 PPP4R1Q8TF05 950 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 TSNARE1Q96NA8 513 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 OR2A14Q96R47 310 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 WDR77Q9BQA1 342 aaPredicted RBP8.69□□□□□ -1.02
SF3A1-206ENST00000471037 SPRTNQ9H040 489 aaPredicted RBP8.69□□□□□ -1.02
SF3A1-206ENST00000471037 CAB39LQ9H9S4 337 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 ZBTB20Q9HC78 741 aaPredicted RBP8.69□□□□□ -1.02
SF3A1-206ENST00000471037 ATP13A2Q9NQ11 1180 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 TXLNGQ9NUQ3 528 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 OR6C2Q9NZP2 312 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 DHCR7Q9UBM7 475 aaKnown RBP8.69□□□□□ -1.02
SF3A1-206ENST00000471037 TRMT6Q9UJA5 497 aaKnown RBP8.69□□□□□ -1.02
SF3A1-206ENST00000471037 CDYLQ9Y232 598 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 MED16Q9Y2X0 877 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 ACOT9Q9Y305 439 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 DHRS7Q9Y394 339 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 PRSS21Q9Y6M0 314 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 CENPEQ02224 2701 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 SEC16AO15027 2179 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 CACNA1DQ01668 2161 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 CELSR2Q9HCU4 2923 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms