RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 CATSPER1Q8NEC5 780 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 OR1N1Q8NGS0 311 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 BRIX1Q8TDN6 353 aaKnown RBP16.6■□□□□ 0.25
COL7A1-208ENST00000470076 GPR21Q99679 349 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 SLX1AQ9BQ83 275 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 C20orf96Q9NUD7 363 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-208ENST00000470076 ABCF3Q9NUQ8 709 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 PTGFRNQ9P2B2 879 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 OSGIN2Q9Y236 505 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 LRBAP50851 2863 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 LOC102723996A0A087X1L8 192 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 TRAV17A0A0B4J275 112 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 GOLGA8MH3BSY2 632 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 HAT1O14929 419 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 NRDCO43847 1150 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 ICAM2P13598 275 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 IMPA1P29218 277 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 COILP38432 576 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-208ENST00000470076 DCTP40126 519 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 AVPR1BP47901 424 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 TNFSF10P50591 281 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 INAQ16352 499 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 CYP1B1Q16678 543 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 ZNF787Q6DD87 383 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 LRRC8EQ6NSJ5 796 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 CCDC137Q6PK04 289 aaKnown RBP16.59■□□□□ 0.25
COL7A1-208ENST00000470076 UBE2R2Q712K3 238 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-208ENST00000470076 ZC3H7AQ8IWR0 971 aaKnown RBP16.59■□□□□ 0.25
COL7A1-208ENST00000470076 CD200R1Q8TD46 325 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 HAS2Q92819 552 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 PBKQ96KB5 322 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 NAP1L3Q99457 506 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-208ENST00000470076 ZNF700Q9H0M5 742 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 OLAHQ9NV23 265 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 TMEM184CQ9NVA4 438 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 FBXO5Q9UKT4 447 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 MKL2Q9ULH7 1088 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 PPP2R2CQ9Y2T4 447 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 MRPS2Q9Y399 296 aaKnown RBP16.59■□□□□ 0.25
COL7A1-208ENST00000470076 JRKLQ9Y4A0 524 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 MAD1L1Q9Y6D9 718 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 CPAMD8Q8IZJ3 1885 aa16.59■□□□□ 0.25
COL7A1-208ENST00000470076 H0YIG0 161 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 H7BY64 318 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 P2RX6O15547 441 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 LRRTM2O43300 516 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 WFS1O76024 890 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 UQCRHP07919 91 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 F7P08709 466 aaPredicted RBP16.58■□□□□ 0.24
COL7A1-208ENST00000470076 CCZ1BP86790 482 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 CCZ1P86791 482 aaPredicted RBP16.58■□□□□ 0.24
COL7A1-208ENST00000470076 FAAH2Q6GMR7 532 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 TMEM205Q6UW68 189 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 PLD3Q8IV08 490 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 CPNE9Q8IYJ1 553 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 SIRT6Q8N6T7 355 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 SIGLEC10Q96LC7 697 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 PRAP1Q96NZ9 151 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 FAM167BQ9BTA0 163 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 PCBD2Q9H0N5 130 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 CCDC177Q9NQR7 707 aaPredicted RBP16.58■□□□□ 0.24
COL7A1-208ENST00000470076 NEU2Q9Y3R4 380 aa16.58■□□□□ 0.24
COL7A1-208ENST00000470076 KCNE1BA0A087WTH5 132 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 HAUS5O94927 633 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 CYC1P08574 325 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 C8orf89P0DMQ9 161 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 RPS15AP62244 130 aaKnown RBP16.57■□□□□ 0.24
COL7A1-208ENST00000470076 PCOLCEQ15113 449 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 SYT16Q17RD7 645 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 UGT3A1Q6NUS8 523 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 PIWIL4Q7Z3Z4 852 aaKnown RBP16.57■□□□□ 0.24
COL7A1-208ENST00000470076 NAT8LQ8N9F0 302 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.57■□□□□ 0.24
COL7A1-208ENST00000470076 MCOLN3Q8TDD5 553 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 METTL21AQ8WXB1 218 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 MS4A14Q96JA4 679 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 MAGEB10Q96LZ2 347 aaPredicted RBP16.57■□□□□ 0.24
COL7A1-208ENST00000470076 AARSD1Q9BTE6 412 aaKnown RBP16.57■□□□□ 0.24
COL7A1-208ENST00000470076 TUBB6Q9BUF5 446 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 RNF32Q9H0A6 362 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 PLA2G3Q9NZ20 509 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 SCN2AQ99250 2005 aa16.57■□□□□ 0.24
COL7A1-208ENST00000470076 A0A1B0GUH1 482 aa16.56■□□□□ 0.24
COL7A1-208ENST00000470076 PGRMC1O00264 195 aaKnown RBP16.56■□□□□ 0.24
COL7A1-208ENST00000470076 JRKO75564 520 aa16.56■□□□□ 0.24
COL7A1-208ENST00000470076 NSA2O95478 260 aaKnown RBP16.56■□□□□ 0.24
COL7A1-208ENST00000470076 STSP08842 583 aa16.56■□□□□ 0.24
COL7A1-208ENST00000470076 RGS4P49798 205 aa16.56■□□□□ 0.24
COL7A1-208ENST00000470076 TBPL1P62380 186 aa16.56■□□□□ 0.24
COL7A1-208ENST00000470076 MPP1Q00013 466 aa16.56■□□□□ 0.24
COL7A1-208ENST00000470076 MAT1AQ00266 395 aaKnown RBP16.56■□□□□ 0.24
COL7A1-208ENST00000470076 PTK6Q13882 451 aa16.56■□□□□ 0.24
COL7A1-208ENST00000470076 HSP90AA5PQ58FG0 334 aa16.56■□□□□ 0.24
COL7A1-208ENST00000470076 ZNF324BQ6AW86 544 aaPredicted RBP16.56■□□□□ 0.24
COL7A1-208ENST00000470076 VN1R4Q7Z5H5 301 aa16.56■□□□□ 0.24
COL7A1-208ENST00000470076 AGGF1Q8N302 714 aaeCLIP16.56■□□□□ 0.24
COL7A1-208ENST00000470076 OR9A4Q8NGU2 314 aa16.56■□□□□ 0.24
COL7A1-208ENST00000470076 GABPB2Q8TAK5 448 aaPredicted RBP16.56■□□□□ 0.24
COL7A1-208ENST00000470076 GRK7Q8WTQ7 553 aa16.56■□□□□ 0.24
COL7A1-208ENST00000470076 THAP11Q96EK4 314 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms