RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ATXN3P54252 364 aaPredicted RBP17.44■□□□□ 0.38
SMC4-211ENST00000469858 PHEXP78562 749 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 PLIN5Q00G26 463 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 FOXM1Q08050 763 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 MTAPQ13126 283 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 EIF2B5Q13144 721 aaKnown RBP17.44■□□□□ 0.38
SMC4-211ENST00000469858 FLOT2Q14254 428 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 SAMD4BQ5PRF9 694 aaKnown RBP17.44■□□□□ 0.38
SMC4-211ENST00000469858 DHDDSQ86SQ9 333 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 SYT12Q8IV01 421 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 UBALD2Q8IYN6 164 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 CDC26Q8NHZ8 85 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 DNAJB14Q8TBM8 379 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 GFM2Q969S9 779 aaKnown RBP17.44■□□□□ 0.38
SMC4-211ENST00000469858 CXorf40BQ96DE9 158 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 PRAP1Q96NZ9 151 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 AIF1LQ9BQI0 150 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 TRIM8Q9BZR9 551 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 KIR3DX1Q9H7L2 352 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 CEP192Q8TEP8 1941 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 C19orf67A6NJJ6 358 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 MAP3K7O43318 606 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 IL6P05231 212 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 PGRP06401 933 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 F3P13726 295 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 SLC6A2P23975 617 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 CLNS1AP54105 237 aaKnown RBP17.44■□□□□ 0.38
SMC4-211ENST00000469858 MS4A2Q01362 244 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 FZD2Q14332 565 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 SPIN4Q56A73 249 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 DPP10Q8N608 796 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 ABHD11Q8NFV4 315 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 OR2A1Q8NGT9 310 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 SLC26A7Q8TE54 656 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 JADE3Q92613 823 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 C11orf24Q96F05 449 aaPredicted RBP17.44■□□□□ 0.38
SMC4-211ENST00000469858 KLHDC7BQ96G42 594 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 METTL2AQ96IZ6 378 aaKnown RBP17.44■□□□□ 0.38
SMC4-211ENST00000469858 OR51B5Q9H339 312 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 GPR27Q9NS67 375 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 ABCD2Q9UBJ2 740 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 KLF15Q9UIH9 416 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 PCDHB11Q9Y5F2 797 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 A6NCN8 305 aa17.43■□□□□ 0.38
SMC4-211ENST00000469858 SAP18O00422 153 aaKnown RBP17.43■□□□□ 0.38
SMC4-211ENST00000469858 NME4O00746 187 aa17.43■□□□□ 0.38
SMC4-211ENST00000469858 DCNP07585 359 aaKnown RBP17.43■□□□□ 0.38
SMC4-211ENST00000469858 CXCR2P25025 360 aa17.43■□□□□ 0.38
SMC4-211ENST00000469858 NDUFS1P28331 727 aa17.43■□□□□ 0.38
SMC4-211ENST00000469858 PIK3CBP42338 1070 aa17.43■□□□□ 0.38
SMC4-211ENST00000469858 RAE1P78406 368 aaKnown RBP17.43■□□□□ 0.38
SMC4-211ENST00000469858 ADCK2Q7Z695 626 aa17.43■□□□□ 0.38
SMC4-211ENST00000469858 SLC15A3Q8IY34 581 aa17.43■□□□□ 0.38
SMC4-211ENST00000469858 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.43■□□□□ 0.385e-13■■■■■ 220.5
SMC4-211ENST00000469858 CHTF18Q8WVB6 975 aa17.43■□□□□ 0.38
SMC4-211ENST00000469858 CLDN23Q96B33 292 aa17.43■□□□□ 0.38
SMC4-211ENST00000469858 NMRK1Q9NWW6 199 aa17.43■□□□□ 0.38
SMC4-211ENST00000469858 SUCOQ9UBS9 1254 aaKnown RBP17.43■□□□□ 0.38
SMC4-211ENST00000469858 CD300AQ9UGN4 299 aa17.43■□□□□ 0.38
SMC4-211ENST00000469858 PPT2Q9UMR5 302 aa17.43■□□□□ 0.38
SMC4-211ENST00000469858 FEZF1A0PJY2 475 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 AKAP10O43572 662 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 SLC19A1P41440 591 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 CYP4F2P78329 520 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 REEP5Q00765 189 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 PRDX1Q06830 199 aaKnown RBP17.42■□□□□ 0.38
SMC4-211ENST00000469858 C6orf10Q5SRN2 563 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 VN1R5Q7Z5H4 357 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 FAM20CQ8IXL6 584 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 KIAA2013Q8IYS2 634 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 GJD3Q8N144 294 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 OR4E2Q8NGC2 313 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 LCN9Q8WX39 176 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 PYDC1Q8WXC3 89 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 ASB9Q96DX5 294 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 OR52E6Q96RD3 313 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 CMTM6Q9NX76 183 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 GMPR2Q9P2T1 348 aaKnown RBP17.42■□□□□ 0.38
SMC4-211ENST00000469858 EML5Q05BV3 1969 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 METTL12A8MUP2 240 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 CELA2BP08218 269 aaPredicted RBP17.42■□□□□ 0.38
SMC4-211ENST00000469858 ANXA4P09525 319 aaPredicted RBP17.42■□□□□ 0.38
SMC4-211ENST00000469858 PCSK2P16519 638 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 TIA1P31483 386 aaKnown RBP eCLIP17.42■□□□□ 0.382e-7■■■□□ 18.7
SMC4-211ENST00000469858 SHMT2P34897 504 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 SESN3P58005 492 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 RPL6Q02878 288 aaKnown RBP17.42■□□□□ 0.38
SMC4-211ENST00000469858 MAPKAPK3Q16644 382 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 PGS1Q32NB8 556 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 RABL3Q5HYI8 236 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 ARMCX6Q7L4S7 300 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 AMIGO1Q86WK6 493 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 RIMKLAQ8IXN7 391 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 ANKRD53Q8N9V6 530 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 GPBAR1Q8TDU6 330 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 TESCQ96BS2 214 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 PPM1MQ96MI6 270 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 GSDMCQ9BYG8 508 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 PCDHAC1Q9H158 963 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 SPHK1Q9NYA1 384 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms