RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 SLC6A12P48065 614 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 ST13P50502 369 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 EPHB3P54753 998 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 TMEM236Q5W0B7 351 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 VRK3Q8IV63 474 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 ATG16L2Q8NAA4 619 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 ASB11Q8WXH4 323 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 HSH2DQ96JZ2 352 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 ALOXE3Q9BYJ1 711 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 TPK1Q9H3S4 243 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 KRT84Q9NSB2 600 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 MBD1Q9UIS9 605 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 NDRG4Q9ULP0 352 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 ABHD14A-ACY1A0A1B0GW23 586 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 KRBA1A5PL33 1030 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 ZNF821O75541 412 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 JRKO75564 520 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 SEMG1P04279 462 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 SERPINB10P48595 397 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 WDR5P61964 334 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 CYP4F8P98187 520 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 MTAPQ13126 283 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 MAD2L1BPQ15013 274 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 Q6ZNB5 142 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 TPRG1Q6ZUI0 275 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 DDX53Q86TM3 631 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 SVOPQ8N4V2 548 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 CDC26Q8NHZ8 85 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 CSGALNACT1Q8TDX6 532 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 UBE2FQ969M7 185 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 ZNF300Q96RE9 604 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 ASPSCR1Q9BZE9 553 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 ATG10Q9H0Y0 220 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 IL21Q9HBE4 155 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 RASSF1Q9NS23 344 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 DNAJC11Q9NVH1 559 aa15.29■□□□□ 0.04
TSPAN4-211ENST00000468468 ZNF106Q9H2Y7 1883 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 MAGEB17A8MXT2 336 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 GPX2P18283 190 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 LAG3P18627 525 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 PPP3CCP48454 512 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 HNMTP50135 292 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 HNRNPFP52597 415 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 PTPN5P54829 565 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 NCS1P62166 190 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 LMAN2Q12907 356 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 CHIT1Q13231 466 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 INAQ16352 499 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 UGT8Q16880 541 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 LRRC26Q2I0M4 334 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 TSPYL5Q86VY4 417 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 PTOV1Q86YD1 416 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 TCEAL8Q8IYN2 117 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 PGBD3Q8N328 593 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 SCAIQ8N9R8 606 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 OR2AP1Q8NGE2 309 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 P2RY13Q9BPV8 354 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 ACOT13Q9NPJ3 140 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 MRPL17Q9NRX2 175 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 GPC6Q9Y625 555 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 EIF3FO00303 357 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 COX7A2P14406 83 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 WNT3P56703 355 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 IFITM3Q01628 133 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 PTSQ03393 145 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 SRSF11Q05519 484 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 KIAA1614Q5VZ46 1190 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 PDE12Q6L8Q7 609 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 ERICH5Q6P6B1 374 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 LINC00299Q6ZSB3 139 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 CBLL1Q75N03 491 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 EIF3MQ7L2H7 374 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 CLECL1Q8IZS7 167 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 DYNC2LI1Q8TCX1 351 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 SCRN2Q96FV2 425 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 LYSMD1Q96S90 227 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 REEP1Q9H902 201 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 ITGB1BP2Q9UKP3 347 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 ERVK-11Q9UQG0 969 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 PMF1-BGLAPU3KQ54 211 aa15.28■□□□□ 0.04
TSPAN4-211ENST00000468468 NRG2O14511 850 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-211ENST00000468468 SCN2BO60939 215 aa15.27■□□□□ 0.04
TSPAN4-211ENST00000468468 BMP4P12644 408 aa15.27■□□□□ 0.04
TSPAN4-211ENST00000468468 PCSK2P16519 638 aa15.27■□□□□ 0.04
TSPAN4-211ENST00000468468 EFNA1P20827 205 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-211ENST00000468468 CLPPQ16740 277 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-211ENST00000468468 TPD52L3Q96J77 140 aa15.27■□□□□ 0.04
TSPAN4-211ENST00000468468 YME1L1Q96TA2 773 aa15.27■□□□□ 0.04
TSPAN4-211ENST00000468468 BBS2Q9BXC9 721 aa15.27■□□□□ 0.04
TSPAN4-211ENST00000468468 CCNB1IP1Q9NPC3 277 aa15.27■□□□□ 0.04
TSPAN4-211ENST00000468468 NOX1Q9Y5S8 564 aa15.27■□□□□ 0.04
TSPAN4-211ENST00000468468 NPIPB8E9PQR5 432 aa15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 NUAK1O60285 661 aa15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 GJA1P17302 382 aa15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 GABRR2P28476 465 aa15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 CD70P32970 193 aa15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 KRT20P35900 424 aa15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 ABRQ12979 859 aa15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 C1orf53Q5VUE5 145 aa15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 OTOP2Q7RTS6 562 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms