RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 LONRF1Q17RB8 773 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 HSP90AA5PQ58FG0 334 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 GARNL3Q5VVW2 1013 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 ZNF787Q6DD87 383 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 ADCK2Q7Z695 626 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 ZC3H7AQ8IWR0 971 aaKnown RBP23.24■■□□□ 1.31
PTCH1-210ENST00000468211 BRIX1Q8TDN6 353 aaKnown RBP23.24■■□□□ 1.31
PTCH1-210ENST00000468211 COG1Q8WTW3 980 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 FAR1Q8WVX9 515 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 RERGQ96A58 199 aaPredicted RBP23.24■■□□□ 1.31
PTCH1-210ENST00000468211 PBKQ96KB5 322 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 PRAP1Q96NZ9 151 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 DRC3Q9H069 523 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 PLA2G3Q9NZ20 509 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 PTGFRNQ9P2B2 879 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 JRKLQ9Y4A0 524 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 ENO3P13929 434 aaPredicted RBP23.23■■□□□ 1.31
PTCH1-210ENST00000468211 THEMIS2Q5TEJ8 643 aa23.23■■□□□ 1.31
PTCH1-210ENST00000468211 B3GNTL1Q67FW5 361 aaPredicted RBP23.23■■□□□ 1.31
PTCH1-210ENST00000468211 UBE2R2Q712K3 238 aaPredicted RBP23.23■■□□□ 1.31
PTCH1-210ENST00000468211 AARSD1Q9BTE6 412 aaKnown RBP23.23■■□□□ 1.31
PTCH1-210ENST00000468211 TGIF2Q9GZN2 237 aa23.23■■□□□ 1.31
PTCH1-210ENST00000468211 MKKSQ9NPJ1 570 aaPredicted RBP23.23■■□□□ 1.31
PTCH1-210ENST00000468211 C14orf105Q9NVL8 296 aa23.23■■□□□ 1.31
PTCH1-210ENST00000468211 ADAMTS6Q9UKP5 1117 aa23.23■■□□□ 1.31
PTCH1-210ENST00000468211 SH2B3Q9UQQ2 575 aa23.23■■□□□ 1.31
PTCH1-210ENST00000468211 PRPF4O43172 522 aaKnown RBP eCLIP23.22■■□□□ 1.31
PTCH1-210ENST00000468211 ZBTB14O43829 449 aa23.22■■□□□ 1.31
PTCH1-210ENST00000468211 JRKO75564 520 aa23.22■■□□□ 1.31
PTCH1-210ENST00000468211 HEXBP07686 556 aa23.22■■□□□ 1.31
PTCH1-210ENST00000468211 VN1R4Q7Z5H5 301 aa23.22■■□□□ 1.31
PTCH1-210ENST00000468211 SIRT6Q8N6T7 355 aa23.22■■□□□ 1.31
PTCH1-210ENST00000468211 OR1N1Q8NGS0 311 aa23.22■■□□□ 1.31
PTCH1-210ENST00000468211 NDNQ99608 321 aa23.22■■□□□ 1.31
PTCH1-210ENST00000468211 MACROD1Q9BQ69 325 aa23.22■■□□□ 1.31
PTCH1-210ENST00000468211 IARS2Q9NSE4 1012 aaKnown RBP23.22■■□□□ 1.31
PTCH1-210ENST00000468211 UTP6Q9NYH9 597 aaKnown RBP23.22■■□□□ 1.31
PTCH1-210ENST00000468211 F10P00742 488 aa23.21■■□□□ 1.31
PTCH1-210ENST00000468211 SERPINA7P05543 415 aa23.21■■□□□ 1.31
PTCH1-210ENST00000468211 ANXA5P08758 320 aa23.21■■□□□ 1.31
PTCH1-210ENST00000468211 CXCR2P25025 360 aa23.21■■□□□ 1.31
PTCH1-210ENST00000468211 PCOLCEQ15113 449 aa23.21■■□□□ 1.31
PTCH1-210ENST00000468211 RNASEH2BQ5TBB1 312 aaKnown RBP23.21■■□□□ 1.31
PTCH1-210ENST00000468211 MBOAT1Q6ZNC8 495 aa23.21■■□□□ 1.31
PTCH1-210ENST00000468211 PRSS41Q7RTY9 318 aa23.21■■□□□ 1.31
PTCH1-210ENST00000468211 LMNTD2Q8IXW0 634 aa23.21■■□□□ 1.31
PTCH1-210ENST00000468211 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.21■■□□□ 1.31
PTCH1-210ENST00000468211 OR9A4Q8NGU2 314 aa23.21■■□□□ 1.31
PTCH1-210ENST00000468211 OSGIN2Q9Y236 505 aa23.21■■□□□ 1.31
PTCH1-210ENST00000468211 COMMD10Q9Y6G5 202 aa23.21■■□□□ 1.31
PTCH1-210ENST00000468211 LOC102723996A0A087X1L8 192 aa23.2■■□□□ 1.3
PTCH1-210ENST00000468211 PGRMC1O00264 195 aaKnown RBP23.2■■□□□ 1.3
PTCH1-210ENST00000468211 BANF1O75531 89 aa23.2■■□□□ 1.3
PTCH1-210ENST00000468211 GABRB3P28472 473 aa23.2■■□□□ 1.3
PTCH1-210ENST00000468211 TBPL1P62380 186 aa23.2■■□□□ 1.3
PTCH1-210ENST00000468211 FAM53BQ14153 422 aa23.2■■□□□ 1.3
PTCH1-210ENST00000468211 TMEM205Q6UW68 189 aa23.2■■□□□ 1.3
PTCH1-210ENST00000468211 CALML6Q8TD86 181 aa23.2■■□□□ 1.3
PTCH1-210ENST00000468211 EEF1AKMT1Q8WVE0 214 aa23.2■■□□□ 1.3
PTCH1-210ENST00000468211 ZNF700Q9H0M5 742 aa23.2■■□□□ 1.3
PTCH1-210ENST00000468211 TMEM184CQ9NVA4 438 aa23.2■■□□□ 1.3
PTCH1-210ENST00000468211 MKL2Q9ULH7 1088 aa23.2■■□□□ 1.3
PTCH1-210ENST00000468211 PDE10AQ9Y233 779 aa23.2■■□□□ 1.3
PTCH1-210ENST00000468211 TXNDC9O14530 226 aa23.19■■□□□ 1.3
PTCH1-210ENST00000468211 BMP10O95393 424 aa23.19■■□□□ 1.3
PTCH1-210ENST00000468211 ITGAMP11215 1152 aa23.19■■□□□ 1.3
PTCH1-210ENST00000468211 EDN3P14138 238 aa23.19■■□□□ 1.3
PTCH1-210ENST00000468211 DCTP40126 519 aa23.19■■□□□ 1.3
PTCH1-210ENST00000468211 ARG2P78540 354 aa23.19■■□□□ 1.3
PTCH1-210ENST00000468211 RPUSD3Q6P087 351 aaKnown RBP23.19■■□□□ 1.3
PTCH1-210ENST00000468211 PPIL6Q8IXY8 311 aa23.19■■□□□ 1.3
PTCH1-210ENST00000468211 C2CD4AQ8NCU7 369 aaPredicted RBP23.19■■□□□ 1.3
PTCH1-210ENST00000468211 IMMP1LQ96LU5 166 aa23.19■■□□□ 1.3
PTCH1-210ENST00000468211 TAAR6Q96RI8 345 aa23.19■■□□□ 1.3
PTCH1-210ENST00000468211 OSBPL9Q96SU4 736 aa23.19■■□□□ 1.3
PTCH1-210ENST00000468211 EBNA1BP2Q99848 306 aaKnown RBP23.19■■□□□ 1.3
PTCH1-210ENST00000468211 SLX1AQ9BQ83 275 aa23.19■■□□□ 1.3
PTCH1-210ENST00000468211 FAM167BQ9BTA0 163 aa23.19■■□□□ 1.3
PTCH1-210ENST00000468211 CCDC177Q9NQR7 707 aaPredicted RBP23.19■■□□□ 1.3
PTCH1-210ENST00000468211 OR2W5A6NFC9 320 aa23.18■■□□□ 1.3
PTCH1-210ENST00000468211 LRRTM2O43300 516 aa23.18■■□□□ 1.3
PTCH1-210ENST00000468211 TNFSF10P50591 281 aa23.18■■□□□ 1.3
PTCH1-210ENST00000468211 CSNK1G2P78368 415 aa23.18■■□□□ 1.3
PTCH1-210ENST00000468211 CRYMQ14894 314 aa23.18■■□□□ 1.3
PTCH1-210ENST00000468211 MSS51Q4VC12 460 aa23.18■■□□□ 1.3
PTCH1-210ENST00000468211 RBM20Q5T481 1227 aaKnown RBP23.18■■□□□ 1.3
PTCH1-210ENST00000468211 SLC35F6Q8N357 371 aa23.18■■□□□ 1.3
PTCH1-210ENST00000468211 RIC8BQ9NVN3 520 aa23.18■■□□□ 1.3
PTCH1-210ENST00000468211 TRMT6Q9UJA5 497 aaKnown RBP23.18■■□□□ 1.3
PTCH1-210ENST00000468211 KCNE1BA0A087WTH5 132 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 IGHV3-20A0A0C4DH32 117 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 FEZF1A0PJY2 475 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 EIF3FO00303 357 aaPredicted RBP23.17■■□□□ 1.3
PTCH1-210ENST00000468211 FDXRP22570 491 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 PGGT1BP53609 377 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 CDKN2DP55273 166 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 NDUFA9Q16795 377 aa23.17■■□□□ 1.3
PTCH1-210ENST00000468211 ZXDCQ2QGD7 858 aaPredicted RBP23.17■■□□□ 1.3
PTCH1-210ENST00000468211 ZNF324BQ6AW86 544 aaPredicted RBP23.17■■□□□ 1.3
PTCH1-210ENST00000468211 AGTRAPQ6RW13 159 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms