RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 CLEC18CQ8NCF0 446 aa18.16■□□□□ 0.5
COL7A1-207ENST00000467985 OR11G2Q8NGC1 345 aa18.16■□□□□ 0.5
COL7A1-207ENST00000467985 FAM45AQ8TCE6 357 aa18.16■□□□□ 0.5
COL7A1-207ENST00000467985 THAP11Q96EK4 314 aa18.16■□□□□ 0.5
COL7A1-207ENST00000467985 PRAP1Q96NZ9 151 aa18.16■□□□□ 0.5
COL7A1-207ENST00000467985 TRIM54Q9BYV2 358 aa18.16■□□□□ 0.5
COL7A1-207ENST00000467985 FAM129AQ9BZQ8 928 aa18.16■□□□□ 0.5
COL7A1-207ENST00000467985 DRC3Q9H069 523 aa18.16■□□□□ 0.5
COL7A1-207ENST00000467985 PLAC1Q9HBJ0 212 aa18.16■□□□□ 0.5
COL7A1-207ENST00000467985 MKKSQ9NPJ1 570 aaPredicted RBP18.16■□□□□ 0.5
COL7A1-207ENST00000467985 CUEDC1Q9NWM3 386 aaPredicted RBP18.16■□□□□ 0.5
COL7A1-207ENST00000467985 TRPC4Q9UBN4 977 aa18.16■□□□□ 0.5
COL7A1-207ENST00000467985 C3orf18Q9UK00 162 aa18.16■□□□□ 0.5
COL7A1-207ENST00000467985 VWA7Q9Y334 891 aa18.16■□□□□ 0.5
COL7A1-207ENST00000467985 ACPPP15309 386 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 SLC26A3P40879 764 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 AP1S2P56377 157 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 HP1BP3Q5SSJ5 553 aaPredicted RBP18.15■□□□□ 0.5
COL7A1-207ENST00000467985 AGAP7PQ5VUJ5 663 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 AGTRAPQ6RW13 159 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 C17orf64Q86WR6 236 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 IQCKQ8N0W5 287 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 FAM26EQ8N5C1 309 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 GPATCH11Q8N954 259 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 BBOF1Q8ND07 529 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 MNS1Q8NEH6 495 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 MMABQ96EY8 250 aaPredicted RBP18.15■□□□□ 0.5
COL7A1-207ENST00000467985 AGAP4Q96P64 663 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 TRIM51Q9BSJ1 452 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 SLC29A3Q9BZD2 475 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 TGIF2Q9GZN2 237 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 LHPPQ9H008 270 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 ZFATQ9P243 1243 aa18.15■□□□□ 0.5
COL7A1-207ENST00000467985 SPTAN1Q13813 2472 aaKnown RBP18.14■□□□□ 0.5
COL7A1-207ENST00000467985 EFCAB8A8MWE9 144 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 MAP2K7O14733 419 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 TSPAN12O95859 305 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 HPP00738 406 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 FDXRP22570 491 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 GRK3P35626 688 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 AVPR1BP47901 424 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 ILF2Q12905 390 aaKnown RBP18.14■□□□□ 0.49
COL7A1-207ENST00000467985 HECTD2Q5U5R9 776 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 TRMT10BQ6PF06 316 aaKnown RBP18.14■□□□□ 0.49
COL7A1-207ENST00000467985 SPNS2Q8IVW8 549 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 ARHGEF39Q8N4T4 335 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 ATL1Q8WXF7 558 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 PWWP2AQ96N64 755 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 HAUS8Q9BT25 410 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 YIPF2Q9BWQ6 316 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 SGPP1Q9BX95 441 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 ILKAPQ9H0C8 392 aaPredicted RBP18.14■□□□□ 0.49
COL7A1-207ENST00000467985 SYNPO2LQ9H987 977 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 DOPEY2Q9Y3R5 2298 aa18.14■□□□□ 0.49
COL7A1-207ENST00000467985 ENO2P09104 434 aaPredicted RBP18.13■□□□□ 0.49
COL7A1-207ENST00000467985 CXCR2P25025 360 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 EMP2P54851 167 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 MGAT5Q09328 741 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 CBLBQ13191 982 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 NAE1Q13564 534 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 PHKG1Q16816 387 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 PLEKHN1Q494U1 663 aaPredicted RBP18.13■□□□□ 0.49
COL7A1-207ENST00000467985 VWA2Q5GFL6 755 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 ATG9BQ674R7 924 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 CAPN13Q6MZZ7 669 aaPredicted RBP18.13■□□□□ 0.49
COL7A1-207ENST00000467985 LCTLQ6UWM7 567 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 PLD3Q8IV08 490 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 PRSS58Q8IYP2 241 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 AMER3Q8N944 861 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 PDLIM5Q96HC4 596 aaKnown RBP18.13■□□□□ 0.49
COL7A1-207ENST00000467985 KRT12Q99456 494 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 WDR83Q9BRX9 315 aaKnown RBP18.13■□□□□ 0.49
COL7A1-207ENST00000467985 TRIM31Q9BZY9 425 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 ATG10Q9H0Y0 220 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 ARL15Q9NXU5 204 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 LUZP4Q9P127 313 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 SLC17A6Q9P2U8 582 aa18.13■□□□□ 0.49
COL7A1-207ENST00000467985 A0A0A6YYC8 382 aaPredicted RBP18.12■□□□□ 0.49
COL7A1-207ENST00000467985 IDSB3KWA1 339 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 E7ESA3 106 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 I3L1I5 382 aaPredicted RBP18.12■□□□□ 0.49
COL7A1-207ENST00000467985 MASP2O00187 686 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 P2RX6O15547 441 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 FOXS1O43638 330 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 HEXBP07686 556 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 CSNK1G2P78368 415 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 PDIA2Q13087 525 aaKnown RBP18.12■□□□□ 0.49
COL7A1-207ENST00000467985 DUPD1Q68J44 220 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 IGFL2Q6UWQ7 119 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 MBOAT1Q6ZNC8 495 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 NDUFAF7Q7L592 441 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 SLC26A11Q86WA9 606 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 ANKMY2Q8IV38 441 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 PARP9Q8IXQ6 854 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 CEP112Q8N8E3 955 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 CAMKVQ8NCB2 501 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 FBXO36Q8NEA4 188 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 NSMCE4AQ9NXX6 385 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 MAP10Q9P2G4 905 aa18.12■□□□□ 0.49
COL7A1-207ENST00000467985 DOCK10Q96BY6 2186 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms