RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 BMP10O95393 424 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 MPC1LP0DKB6 136 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 SLC1A2P43004 574 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 TNFSF10P50591 281 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 EFNA3P52797 238 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 SNRPNP63162 240 aaKnown RBP19.98■□□□□ 0.79
COL9A3-207ENST00000467819 ABATP80404 500 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 PCOLCEQ15113 449 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 ARMC3Q5W041 872 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 ZNF662Q6ZS27 426 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 FJX1Q86VR8 437 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 FBXO15Q8NCQ5 510 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-207ENST00000467819 KCNJ9Q92806 393 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 GPR21Q99679 349 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.98■□□□□ 0.79
COL9A3-207ENST00000467819 MRPS2Q9Y399 296 aaKnown RBP19.98■□□□□ 0.79
COL9A3-207ENST00000467819 ABCA12Q86UK0 2595 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 ZCWPW2A0A1B0GU75 182 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 SDR42E2A6NKP2 422 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 H7BY64 318 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 ZBTB14O43829 449 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 ITGAMP11215 1152 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 MLNP12872 115 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 ENO3P13929 434 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-207ENST00000467819 IMPA1P29218 277 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 KCNK10P57789 538 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 NDUFA9Q16795 377 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 RIPOR1Q6ZS17 1223 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 UBE2R2Q712K3 238 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-207ENST00000467819 PIWIL4Q7Z3Z4 852 aaKnown RBP19.97■□□□□ 0.79
COL9A3-207ENST00000467819 CPNE9Q8IYJ1 553 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 OR9A4Q8NGU2 314 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 HAS2Q92819 552 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 PRAP1Q96NZ9 151 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 SERPINB12Q96P63 405 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 TAAR6Q96RI8 345 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 EBNA1BP2Q99848 306 aaKnown RBP19.97■□□□□ 0.79
COL9A3-207ENST00000467819 XAB2Q9HCS7 855 aaKnown RBP19.97■□□□□ 0.79
COL9A3-207ENST00000467819 KLHL42Q9P2K6 505 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 DHRS7Q9Y394 339 aa19.97■□□□□ 0.79
COL9A3-207ENST00000467819 LOC102723996A0A087X1L8 192 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 MAGEB16A2A368 324 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 GFYI3L273 518 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 PCDH17O14917 1159 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 STSP08842 583 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 AVPR1BP47901 424 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 RELAQ04206 551 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 FAM53BQ14153 422 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 ZRSR2Q15696 482 aaKnown RBP19.96■□□□□ 0.79
COL9A3-207ENST00000467819 MFSD4BQ5TF39 518 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 C1QL3Q5VWW1 255 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 TMEM205Q6UW68 189 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 CYHR1Q6ZMK1 362 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 LRRC56Q8IYG6 542 aaPredicted RBP19.96■□□□□ 0.79
COL9A3-207ENST00000467819 CD200R1Q8TD46 325 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 MAGOHBQ96A72 148 aaKnown RBP19.96■□□□□ 0.79
COL9A3-207ENST00000467819 ZNF700Q9H0M5 742 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 C20orf96Q9NUD7 363 aaPredicted RBP19.96■□□□□ 0.79
COL9A3-207ENST00000467819 MAD1L1Q9Y6D9 718 aa19.96■□□□□ 0.79
COL9A3-207ENST00000467819 WDPCPO95876 746 aa19.95■□□□□ 0.78
COL9A3-207ENST00000467819 C8orf89P0DMQ9 161 aa19.95■□□□□ 0.78
COL9A3-207ENST00000467819 SKIV2L2P42285 1042 aaKnown RBP19.95■□□□□ 0.78
COL9A3-207ENST00000467819 TDGF1P3P51864 188 aa19.95■□□□□ 0.78
COL9A3-207ENST00000467819 MPP1Q00013 466 aa19.95■□□□□ 0.78
COL9A3-207ENST00000467819 LONRF1Q17RB8 773 aa19.95■□□□□ 0.78
COL9A3-207ENST00000467819 ZNF324BQ6AW86 544 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-207ENST00000467819 HIBCHQ6NVY1 386 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-207ENST00000467819 PRSS41Q7RTY9 318 aa19.95■□□□□ 0.78
COL9A3-207ENST00000467819 MCUQ8NE86 351 aa19.95■□□□□ 0.78
COL9A3-207ENST00000467819 NR4A3Q92570 626 aa19.95■□□□□ 0.78
COL9A3-207ENST00000467819 CCDC177Q9NQR7 707 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-207ENST00000467819 IGHV3-20A0A0C4DH32 117 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 A0A1B0GUH1 482 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 SEC24DO94855 1032 aaPredicted RBP19.94■□□□□ 0.78
COL9A3-207ENST00000467819 TBPL1P62380 186 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 SRSF11Q05519 484 aaKnown RBP19.94■□□□□ 0.78
COL9A3-207ENST00000467819 INAQ16352 499 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 MINDY4Q4G0A6 757 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 ABHD17BQ5VST6 288 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 LANCL3Q6ZV70 420 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 VN1R4Q7Z5H5 301 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 SHISA5Q8N114 240 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 AGGF1Q8N302 714 aaeCLIP19.94■□□□□ 0.78
COL9A3-207ENST00000467819 CALML6Q8TD86 181 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 METTL21AQ8WXB1 218 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 MS4A14Q96JA4 679 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 MACROD1Q9BQ69 325 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 TUBB6Q9BUF5 446 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 VN1R1Q9GZP7 353 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 TMEM184CQ9NVA4 438 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 HCN3Q9P1Z3 774 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 FBXO5Q9UKT4 447 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 COMMD10Q9Y6G5 202 aa19.94■□□□□ 0.78
COL9A3-207ENST00000467819 HAUS5O94927 633 aa19.93■□□□□ 0.78
COL9A3-207ENST00000467819 ICAM2P13598 275 aa19.93■□□□□ 0.78
COL9A3-207ENST00000467819 IL1RNP18510 177 aa19.93■□□□□ 0.78
COL9A3-207ENST00000467819 RPS15AP62244 130 aaKnown RBP19.93■□□□□ 0.78
COL9A3-207ENST00000467819 AP2B1P63010 937 aa19.93■□□□□ 0.78
COL9A3-207ENST00000467819 ZNF33BQ06732 778 aa19.93■□□□□ 0.78
COL9A3-207ENST00000467819 GFRALQ6UXV0 394 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms