RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CREB3L4Q8TEY5 395 aa9.61□□□□□ -0.87
HDAC3-203ENST00000467533 SPATA13Q96N96 652 aa9.61□□□□□ -0.87
HDAC3-203ENST00000467533 YIPF4Q9BSR8 244 aa9.61□□□□□ -0.87
HDAC3-203ENST00000467533 RAB11FIP5Q9BXF6 653 aa9.61□□□□□ -0.87
HDAC3-203ENST00000467533 ISCUQ9H1K1 167 aa9.61□□□□□ -0.87
HDAC3-203ENST00000467533 SMARCAL1Q9NZC9 954 aa9.61□□□□□ -0.87
HDAC3-203ENST00000467533 IMPACTQ9P2X3 320 aa9.61□□□□□ -0.87
HDAC3-203ENST00000467533 ARHGAP21Q5T5U3 1957 aa9.61□□□□□ -0.87
HDAC3-203ENST00000467533 LRRD1A4D1F6 860 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 FAM47E-STBD1D6RA91 191 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 QSOX1O00391 747 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 CDK2AP1O14519 115 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 BCKDKO14874 412 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 FOXS1O43638 330 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 CRTAMO95727 393 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 AGTP01019 485 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 CYC1P08574 325 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 KDELR1P24390 212 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 PLGLB1Q02325 96 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 PLOD1Q02809 727 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-203ENST00000467533 ACTN3Q08043 901 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-203ENST00000467533 KLHL30Q0D2K2 578 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 FILIP1LQ4L180 1135 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 SFT2D3Q587I9 215 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 C1orf185Q5T7R7 199 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 SLC9A4Q6AI14 798 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 LRRC8BQ6P9F7 803 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 SLC13A5Q86YT5 568 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-203ENST00000467533 ZFP62Q8NB50 900 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-203ENST00000467533 OR2L3Q8NG85 312 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 RAPGEF5Q92565 580 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 RNASE6Q93091 150 aaKnown RBP9.6□□□□□ -0.87
HDAC3-203ENST00000467533 FCRL5Q96RD9 977 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 ERGIC2Q96RQ1 377 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 SMC6Q96SB8 1091 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 LPAR4Q99677 370 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 MAK16Q9BXY0 300 aaKnown RBP9.6□□□□□ -0.87
HDAC3-203ENST00000467533 MYO6Q9UM54 1294 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 PRSS21Q9Y6M0 314 aa9.6□□□□□ -0.87
HDAC3-203ENST00000467533 DNAJC13O75165 2243 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 TRBV5-4A0A0C4DH59 114 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 OR2A25A4D2G3 310 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 TUBAL3A6NHL2 446 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 SOWAHDA6NJG2 315 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 FAM166BA8MTA8 275 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 ACOT7O00154 380 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 SYT5O00445 386 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 CES2O00748 559 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 FCHO1O14526 889 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 GOSR1O95249 250 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 EPXP11678 715 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 ZFXP17010 805 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-203ENST00000467533 ARHGAP25P42331 645 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 AVPR1BP47901 424 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 HLCSP50747 726 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 ZNF140P52738 457 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-203ENST00000467533 SLC26A5P58743 744 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 WASHC5Q12768 1159 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 GRB7Q14451 532 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 USP10Q14694 798 aaKnown RBP9.59□□□□□ -0.87
HDAC3-203ENST00000467533 NAA25Q14CX7 972 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 DBN1Q16643 649 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 CT47A1Q5JQC4 288 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-203ENST00000467533 GARNL3Q5VVW2 1013 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 RTL6Q6ICC9 239 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 PID1Q7Z2X4 250 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 RFX6Q8HWS3 928 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 CYP4Z2PQ8N1L4 340 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 KIF2BQ8N4N8 673 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 RAB42Q8N4Z0 105 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 RELL2Q8NC24 303 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-203ENST00000467533 TFB1MQ8WVM0 346 aaKnown RBP9.59□□□□□ -0.87
HDAC3-203ENST00000467533 RERGQ96A58 199 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-203ENST00000467533 SH3GL2Q99962 352 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 APOL2Q9BQE5 337 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 RSPH14Q9UHP6 348 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 KLK4Q9Y5K2 254 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 ZNF407Q9C0G0 2248 aa9.59□□□□□ -0.87
HDAC3-203ENST00000467533 A0A0U1RQJ8 604 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 OR14I1A6ND48 311 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 OR2W5A6NFC9 320 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 ARHGEF33A8MVX0 844 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 SLC16A5O15375 505 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 WDR1O75083 606 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 OR56A5P0C7T3 313 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 BMP5P22003 454 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 CMPK1P30085 196 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 XCR1P46094 333 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 TYRO3Q06418 890 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 DMTNQ08495 405 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 PTK6Q13882 451 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 RIPPLY2Q5TAB7 128 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 E4F1Q66K89 784 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-203ENST00000467533 TTC23LQ6PF05 361 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 PRSS57Q6UWY2 283 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 SLC22A15Q8IZD6 547 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 ZNF567Q8N184 647 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 ENOX1Q8TC92 643 aaKnown RBP9.58□□□□□ -0.88
HDAC3-203ENST00000467533 PERPQ96FX8 193 aa9.58□□□□□ -0.88
HDAC3-203ENST00000467533 DNAJC1Q96KC8 554 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms