RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 TSPAN8P19075 237 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 ACADLP28330 430 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 CCT8P50990 548 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 APOFQ13790 326 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 TSNQ15631 228 aaKnown RBP17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 THEMIS2Q5TEJ8 643 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 LCN8Q6JVE9 175 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 DUS1LQ6P1R4 473 aaKnown RBP17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 ABRAXAS1Q6UWZ7 409 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 RETREG3Q86VR2 466 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 CHERPQ8IWX8 916 aaKnown RBP17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 SLC25A45Q8N413 288 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 TRPC4APQ8TEL6 797 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 ZDHHC1Q8WTX9 485 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 PATE1Q8WXA2 126 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 TFGQ92734 400 aaPredicted RBP17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 SLCO4A1Q96BD0 722 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 TUBGCP3Q96CW5 907 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 FOPNLQ96NB1 174 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 TRIM54Q9BYV2 358 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 PCDHAC1Q9H158 963 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 ASF1AQ9Y294 204 aa17.44■□□□□ 0.38
ATPAF2-202ENST00000462733 LNP1A1A4G5 178 aa17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 A6NCN8 305 aa17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 ESRRBO95718 433 aa17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 UROSP10746 265 aa17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 XKR7Q5GH72 579 aa17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 BLOC1S3Q6QNY0 202 aa17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 WASH2PQ6VEQ5 465 aa17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 UBE2R2Q712K3 238 aaPredicted RBP17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 ALDH16A1Q8IZ83 802 aa17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 DGCR14Q96DF8 476 aaKnown RBP17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 TUBB1Q9H4B7 451 aa17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 WASH6PQ9NQA3 447 aa17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 AIG1Q9NVV5 245 aa17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 PCOLCE2Q9UKZ9 415 aa17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 GPR45Q9Y5Y3 372 aa17.43■□□□□ 0.38
ATPAF2-202ENST00000462733 EP300Q09472 2414 aaPredicted RBP17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 FXYD1O00168 92 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 YKT6O15498 198 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 HGFP14210 728 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 BDKRB1P46663 353 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 CDKL1Q00532 357 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 MYBPC1Q00872 1141 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 GRB7Q14451 532 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 RPS6KA2Q15349 733 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 RPE65Q16518 533 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 PDCD4Q53EL6 469 aaKnown RBP17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 BORAQ6PGQ7 559 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 ERMP1Q7Z2K6 904 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 SDR16C5Q8N3Y7 309 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 SAP25Q8TEE9 199 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 ASB11Q8WXH4 323 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 CNBD2Q96M20 576 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 NSUN5Q96P11 429 aaKnown RBP17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 FERD3LQ96RJ6 166 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 SEMA4GQ9NTN9 838 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 CCM2LQ9NUG4 571 aaPredicted RBP17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 RIC8BQ9NVN3 520 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 MAP10Q9P2G4 905 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 PCTPQ9UKL6 214 aa17.42■□□□□ 0.38
ATPAF2-202ENST00000462733 NME4O00746 187 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 HNRNPRO43390 633 aaKnown RBP17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 NPPAP01160 153 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 CAPN3P20807 821 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 KRT33BQ14525 404 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 C6orf52Q5T4I8 152 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 IYDQ6PHW0 289 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 HOMEZQ8IX15 550 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 NAGSQ8N159 534 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 OR5AR1Q8NGP9 310 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 LRTOMTQ8WZ04 291 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 SLC45A3Q96JT2 553 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 ZNF382Q96SR6 550 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 HAUS8Q9BT25 410 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 BRINP2Q9C0B6 783 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 NUDT4Q9NZJ9 180 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 ACTR3BQ9P1U1 418 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 ZNF624Q9P2J8 865 aaPredicted RBP17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 CIDEBQ9UHD4 219 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 CSNK1G3Q9Y6M4 447 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 PRAMEF33A0A0G2JMD5 474 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 KRT87PA6NCN2 255 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 LRRC14BA6NHZ5 514 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 ARHGEF33A8MVX0 844 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 GIPC1O14908 333 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 PSIP1O75475 530 aaKnown RBP17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 C8GP07360 202 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 MTHFD1P11586 935 aaKnown RBP17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 FCGR1AP12314 374 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 FOXA1P55317 472 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 PRKG2Q13237 762 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 RCAN2Q14206 197 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 PHKG1Q16816 387 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 INTS11Q5TA45 600 aaKnown RBP17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 PPP4R4Q6NUP7 873 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 SBSNQ6UWP8 590 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 FRA10AC1Q70Z53 315 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 ADAMTSL2Q86TH1 951 aa17.41■□□□□ 0.38
ATPAF2-202ENST00000462733 SLC15A3Q8IY34 581 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms