RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 TSPAN11A1L157 253 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 ANTXRLA6NF34 631 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 NPIPB15A6NHN6 443 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-204ENST00000462658 FAM47DPA6NHR8 397 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 C16orf96A6NNT2 1141 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 A8MX80 341 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 SPECC1L-ADORA2AF8WAN1 911 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 H7C0S8 307 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 K7EQS6 105 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 COPEO14579 308 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 TYROBPO43914 113 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 ALDOAP04075 364 aaKnown RBP7.2□□□□□ -1.26
UBE4B-204ENST00000462658 CYP2A6P11509 494 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-204ENST00000462658 NFKBIAP25963 317 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 TYK2P29597 1187 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 RPA3P35244 121 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-204ENST00000462658 FOLR3P41439 243 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 ABCG1P45844 678 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 LEPRP48357 1165 aaKnown RBP7.2□□□□□ -1.26
UBE4B-204ENST00000462658 CD151P48509 253 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 POLD2P49005 469 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 SLC18A1P54219 525 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 MPP1Q00013 466 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 FASTKD1Q53R41 847 aaKnown RBP7.2□□□□□ -1.26
UBE4B-204ENST00000462658 ICE2Q659A1 982 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 TTC19Q6DKK2 380 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-204ENST00000462658 CNSTQ6PJW8 725 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 KCTD20Q7Z5Y7 419 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 GALNT7Q86SF2 657 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 MRGPRGQ86SM5 289 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 LDB1Q86U70 411 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-204ENST00000462658 TSPAN33Q86UF1 283 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 MGARPQ8TDB4 240 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 ACMSDQ8TDX5 336 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 CENPTQ96BT3 561 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 EID2BQ96D98 161 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 VPS39Q96JC1 886 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 MCCC1Q96RQ3 725 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-204ENST00000462658 ACOX2Q99424 681 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 NELL2Q99435 816 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 GPR22Q99680 433 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 C19orf43Q9BQ61 176 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 UNKQ9C0B0 810 aaKnown RBP7.2□□□□□ -1.26
UBE4B-204ENST00000462658 C8orf33Q9H7E9 229 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-204ENST00000462658 ZDHHC4Q9NPG8 344 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 INTS9Q9NV88 658 aaKnown RBP7.2□□□□□ -1.26
UBE4B-204ENST00000462658 ZSCAN32Q9NX65 697 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 MARCH4Q9P2E8 410 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-204ENST00000462658 DKK3Q9UBP4 350 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 MID2Q9UJV3 735 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 SLC39A10Q9ULF5 831 aa7.2□□□□□ -1.26
UBE4B-204ENST00000462658 KIF26AQ9ULI4 1882 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-204ENST00000462658 MIA3Q5JRA6 1907 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 POM121BA6NF01 834 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 KPNA3O00505 521 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-204ENST00000462658 NPC1O15118 1278 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 PFDN6O15212 129 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 NDUFS3O75489 264 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 ZWINTO95229 277 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 IL1BP01584 269 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 PRSS56P0CW18 603 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 OGNP20774 298 aaKnown RBP7.19□□□□□ -1.26
UBE4B-204ENST00000462658 SAT1P21673 171 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 PPIFP30405 207 aaKnown RBP7.19□□□□□ -1.26
UBE4B-204ENST00000462658 FOXN2P32314 431 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 CCT5P48643 541 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 SERPINB8P50452 374 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 CLCN5P51795 746 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 DGKEP52429 567 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 NXPH1P58417 271 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 GNGT1P63211 74 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 XIAPP98170 497 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 SATB1Q01826 763 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 SEMG2Q02383 582 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 ILF2Q12905 390 aaKnown RBP7.19□□□□□ -1.26
UBE4B-204ENST00000462658 PEX6Q13608 980 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 ENPP2Q13822 863 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 DAG1Q14118 895 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 ARHGEF7Q14155 803 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 E2F2Q14209 437 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 SEMA3AQ14563 771 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 ELAVL3Q14576 367 aaKnown RBP7.19□□□□□ -1.26
UBE4B-204ENST00000462658 PON2Q15165 354 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 PTCHD3Q3KNS1 767 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 POM121L1PQ3SYA9 428 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 ZRANB3Q5FWF4 1079 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 ZNF789Q5FWF6 425 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 LRRC73Q5JTD7 316 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 LRRC66Q68CR7 880 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 SFRP4Q6FHJ7 346 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-204ENST00000462658 ERAP2Q6P179 960 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 TAS2R42Q7RTR8 314 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 CMC1Q7Z7K0 106 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 DSG4Q86SJ6 1040 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 RALGPS2Q86X27 583 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-204ENST00000462658 PNPLA1Q8N8W4 532 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 GPATCH11Q8N954 259 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 ACVR1CQ8NER5 493 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 TCP10LQ8TDR4 215 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 DENND1AQ8TEH3 1009 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms